Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nhej1Q3KNJ2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nhej1Q3KNJ2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Nhej1Q3KNJ2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nhej1Q3KNJ2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nhej1Q3KNJ2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Nhej1Q3KNJ2 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nhej1Q3KNJ2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nhej1Q3KNJ2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Nhej1Q3KNJ2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nhej1Q3KNJ2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
Nhej1Q3KNJ2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nhej1Q3KNJ2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nhej1Q3KNJ2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Nhej1Q3KNJ2 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nhej1Q3KNJ2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
Nhej1Q3KNJ2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Nhej1Q3KNJ2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nhej1Q3KNJ2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Nhej1Q3KNJ2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Gm24589-201ENSMUST00000116692 94 ntBASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Gm9103-201ENSMUST00000119371 405 ntBASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Gm14042-201ENSMUST00000120139 833 ntBASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Gm21362-201ENSMUST00000194272 928 ntBASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Nhej1Q3KNJ2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Gm7977-201ENSMUST00000193787 748 ntBASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Olfr286-202ENSMUST00000205305 969 ntBASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nhej1Q3KNJ2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Gm2272-201ENSMUST00000194903 582 ntBASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Gm2451-201ENSMUST00000199447 999 ntBASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Gm10290-201ENSMUST00000200451 999 ntBASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms