Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim63Q38HM4 Gm7049-201ENSMUST00000223520 1712 ntBASIC12□□□□□ -0.49
Trim63Q38HM4 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim63Q38HM4 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim63Q38HM4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim63Q38HM4 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Trim63Q38HM4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Gm7367-201ENSMUST00000057611 492 ntBASIC11.98□□□□□ -0.49
Trim63Q38HM4 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim63Q38HM4 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms