Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cxcr5Q04683 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Cxcr5Q04683 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Gm14042-201ENSMUST00000120139 833 ntBASIC13.85□□□□□ -0.19
Cxcr5Q04683 Gm7862-201ENSMUST00000121461 292 ntBASIC13.85□□□□□ -0.19
Cxcr5Q04683 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.85□□□□□ -0.19
Cxcr5Q04683 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcr5Q04683 AV026068-213ENSMUST00000223675 1171 ntBASIC13.85□□□□□ -0.19
Cxcr5Q04683 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.85□□□□□ -0.19
Cxcr5Q04683 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cxcr5Q04683 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.84□□□□□ -0.19
Cxcr5Q04683 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcr5Q04683 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Cxcr5Q04683 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cxcr5Q04683 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cxcr5Q04683 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cxcr5Q04683 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Cxcr5Q04683 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.83□□□□□ -0.19
Cxcr5Q04683 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcr5Q04683 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcr5Q04683 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcr5Q04683 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcr5Q04683 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Cxcr5Q04683 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcr5Q04683 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcr5Q04683 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcr5Q04683 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cxcr5Q04683 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cxcr5Q04683 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcr5Q04683 Gm24589-201ENSMUST00000116692 94 ntBASIC13.83□□□□□ -0.2
Cxcr5Q04683 Gm7153-201ENSMUST00000117092 455 ntBASIC13.83□□□□□ -0.2
Cxcr5Q04683 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.83□□□□□ -0.2
Cxcr5Q04683 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcr5Q04683 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.83□□□□□ -0.2
Cxcr5Q04683 Gm2451-201ENSMUST00000199447 999 ntBASIC13.83□□□□□ -0.2
Cxcr5Q04683 Gm10290-201ENSMUST00000200451 999 ntBASIC13.83□□□□□ -0.2
Cxcr5Q04683 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cxcr5Q04683 Olfr286-202ENSMUST00000205305 969 ntBASIC13.83□□□□□ -0.2
Cxcr5Q04683 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.83□□□□□ -0.2
Cxcr5Q04683 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcr5Q04683 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcr5Q04683 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcr5Q04683 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcr5Q04683 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.83□□□□□ -0.2
Cxcr5Q04683 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Cxcr5Q04683 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcr5Q04683 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms