Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.52□□□□□ -0.09
Col6a2Q02788 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.52□□□□□ -0.09
Col6a2Q02788 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a2Q02788 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Col6a2Q02788 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Col6a2Q02788 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.51□□□□□ -0.09
Col6a2Q02788 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.51□□□□□ -0.09
Col6a2Q02788 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Col6a2Q02788 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.51□□□□□ -0.09
Col6a2Q02788 Gm28630-201ENSMUST00000187806 498 ntBASIC14.51□□□□□ -0.09
Col6a2Q02788 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Col6a2Q02788 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Col6a2Q02788 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.51□□□□□ -0.09
Col6a2Q02788 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.51□□□□□ -0.09
Col6a2Q02788 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a2Q02788 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Col6a2Q02788 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a2Q02788 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a2Q02788 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Col6a2Q02788 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a2Q02788 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a2Q02788 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a2Q02788 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a2Q02788 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.5□□□□□ -0.09
Col6a2Q02788 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a2Q02788 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Col6a2Q02788 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a2Q02788 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a2Q02788 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a2Q02788 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a2Q02788 Gm37230-201ENSMUST00000194491 818 ntBASIC14.5□□□□□ -0.09
Col6a2Q02788 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a2Q02788 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.5□□□□□ -0.09
Col6a2Q02788 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a2Q02788 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a2Q02788 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a2Q02788 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a2Q02788 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a2Q02788 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a2Q02788 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.5□□□□□ -0.09
Col6a2Q02788 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a2Q02788 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a2Q02788 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.5□□□□□ -0.09
Col6a2Q02788 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a2Q02788 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.5□□□□□ -0.09
Col6a2Q02788 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a2Q02788 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a2Q02788 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a2Q02788 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a2Q02788 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a2Q02788 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a2Q02788 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a2Q02788 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a2Q02788 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a2Q02788 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a2Q02788 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a2Q02788 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a2Q02788 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col6a2Q02788 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Col6a2Q02788 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a2Q02788 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a2Q02788 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.49□□□□□ -0.09
Col6a2Q02788 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col6a2Q02788 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Col6a2Q02788 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a2Q02788 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a2Q02788 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a2Q02788 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
Col6a2Q02788 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms