Protein–RNA interactions for Protein: P98083

Shc1, SHC-transforming protein 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc1P98083 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shc1P98083 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shc1P98083 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shc1P98083 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shc1P98083 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shc1P98083 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shc1P98083 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shc1P98083 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shc1P98083 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Shc1P98083 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shc1P98083 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Shc1P98083 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shc1P98083 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Shc1P98083 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shc1P98083 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Shc1P98083 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shc1P98083 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shc1P98083 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shc1P98083 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shc1P98083 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Shc1P98083 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shc1P98083 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shc1P98083 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shc1P98083 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Shc1P98083 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.08□□□□□ -0.32
Shc1P98083 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shc1P98083 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shc1P98083 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shc1P98083 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shc1P98083 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.08□□□□□ -0.32
Shc1P98083 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shc1P98083 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.08□□□□□ -0.32
Shc1P98083 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Shc1P98083 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shc1P98083 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Shc1P98083 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shc1P98083 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shc1P98083 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Shc1P98083 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.07□□□□□ -0.32
Shc1P98083 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Shc1P98083 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.07□□□□□ -0.32
Shc1P98083 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.07□□□□□ -0.32
Shc1P98083 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.07□□□□□ -0.32
Shc1P98083 Gm45098-201ENSMUST00000207179 657 ntBASIC13.07□□□□□ -0.32
Shc1P98083 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.07□□□□□ -0.32
Shc1P98083 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Shc1P98083 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Shc1P98083 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Shc1P98083 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Shc1P98083 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Shc1P98083 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shc1P98083 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shc1P98083 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.06□□□□□ -0.32
Shc1P98083 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shc1P98083 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shc1P98083 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shc1P98083 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.06□□□□□ -0.32
Shc1P98083 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shc1P98083 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Shc1P98083 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shc1P98083 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms