Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.31□□□□□ -0.28
Scn1bP97952 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1bP97952 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.31□□□□□ -0.28
Scn1bP97952 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1bP97952 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Scn1bP97952 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1bP97952 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1bP97952 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1bP97952 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1bP97952 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1bP97952 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1bP97952 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1bP97952 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Scn1bP97952 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Scn1bP97952 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1bP97952 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1bP97952 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1bP97952 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1bP97952 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1bP97952 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Scn1bP97952 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Scn1bP97952 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1bP97952 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1bP97952 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1bP97952 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1bP97952 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1bP97952 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1bP97952 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1bP97952 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Scn1bP97952 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Scn1bP97952 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1bP97952 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1bP97952 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Scn1bP97952 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Scn1bP97952 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1bP97952 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.3□□□□□ -0.28
Scn1bP97952 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Scn1bP97952 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1bP97952 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1bP97952 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.3□□□□□ -0.28
Scn1bP97952 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1bP97952 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.3□□□□□ -0.28
Scn1bP97952 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1bP97952 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1bP97952 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.3□□□□□ -0.28
Scn1bP97952 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1bP97952 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.3□□□□□ -0.28
Scn1bP97952 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1bP97952 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1bP97952 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1bP97952 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1bP97952 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1bP97952 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1bP97952 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1bP97952 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1bP97952 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Scn1bP97952 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1bP97952 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1bP97952 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1bP97952 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1bP97952 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1bP97952 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1bP97952 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1bP97952 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1bP97952 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1bP97952 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Scn1bP97952 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.29□□□□□ -0.28
Scn1bP97952 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1bP97952 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1bP97952 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Scn1bP97952 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Scn1bP97952 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1bP97952 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1bP97952 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1bP97952 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1bP97952 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1bP97952 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.29□□□□□ -0.28
Scn1bP97952 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.29□□□□□ -0.28
Scn1bP97952 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1bP97952 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Scn1bP97952 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1bP97952 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1bP97952 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1bP97952 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1bP97952 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
Scn1bP97952 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Scn1bP97952 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Scn1bP97952 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Scn1bP97952 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1bP97952 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1bP97952 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1bP97952 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Scn1bP97952 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1bP97952 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1bP97952 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.28□□□□□ -0.28
Scn1bP97952 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1bP97952 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Scn1bP97952 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Scn1bP97952 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
Scn1bP97952 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms