Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
IhhP97812 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
IhhP97812 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
IhhP97812 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IhhP97812 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
IhhP97812 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
IhhP97812 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
IhhP97812 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.03■□□□□ -0
IhhP97812 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.03■□□□□ -0
IhhP97812 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.03■□□□□ -0
IhhP97812 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
IhhP97812 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.03■□□□□ -0
IhhP97812 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IhhP97812 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.03■□□□□ -0
IhhP97812 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
IhhP97812 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IhhP97812 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.03■□□□□ -0
IhhP97812 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IhhP97812 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IhhP97812 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IhhP97812 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IhhP97812 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.03■□□□□ -0
IhhP97812 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.03■□□□□ -0
IhhP97812 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.03■□□□□ -0
IhhP97812 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.03■□□□□ -0
IhhP97812 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
IhhP97812 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.03■□□□□ -0
IhhP97812 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.03■□□□□ -0
IhhP97812 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.03■□□□□ -0
IhhP97812 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.03■□□□□ -0
IhhP97812 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IhhP97812 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IhhP97812 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IhhP97812 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
IhhP97812 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IhhP97812 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.03■□□□□ -0
IhhP97812 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IhhP97812 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IhhP97812 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IhhP97812 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IhhP97812 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
IhhP97812 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.03■□□□□ -0
IhhP97812 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IhhP97812 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.02■□□□□ -0
IhhP97812 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
IhhP97812 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IhhP97812 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.02■□□□□ -0
IhhP97812 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.02■□□□□ -0
IhhP97812 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
IhhP97812 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IhhP97812 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.02■□□□□ -0
IhhP97812 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.02■□□□□ -0
IhhP97812 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
IhhP97812 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IhhP97812 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.02■□□□□ -0
IhhP97812 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
IhhP97812 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.02■□□□□ -0
IhhP97812 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.02■□□□□ -0
IhhP97812 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.02■□□□□ -0
IhhP97812 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IhhP97812 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
IhhP97812 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
IhhP97812 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
IhhP97812 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.02□□□□□ -0.01
IhhP97812 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
IhhP97812 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
IhhP97812 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
IhhP97812 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
IhhP97812 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
IhhP97812 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.02□□□□□ -0.01
IhhP97812 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IhhP97812 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IhhP97812 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IhhP97812 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IhhP97812 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
IhhP97812 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IhhP97812 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IhhP97812 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IhhP97812 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
IhhP97812 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IhhP97812 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IhhP97812 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IhhP97812 Gm14767-201ENSMUST00000121559 586 ntBASIC15.01□□□□□ -0.01
IhhP97812 Gm12882-201ENSMUST00000121696 517 ntBASIC15.01□□□□□ -0.01
IhhP97812 Gm15487-201ENSMUST00000122373 465 ntBASIC15.01□□□□□ -0.01
IhhP97812 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IhhP97812 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.01□□□□□ -0.01
IhhP97812 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
IhhP97812 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IhhP97812 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
IhhP97812 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
IhhP97812 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
IhhP97812 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
IhhP97812 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IhhP97812 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IhhP97812 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IhhP97812 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
IhhP97812 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.01□□□□□ -0.01
IhhP97812 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IhhP97812 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms