Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.41□□□□□ -0.26
Cacna1aP97445 Gm26461-201ENSMUST00000175064 290 ntBASIC13.41□□□□□ -0.26
Cacna1aP97445 Gm45453-201ENSMUST00000211758 853 ntBASIC13.41□□□□□ -0.26
Cacna1aP97445 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cacna1aP97445 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cacna1aP97445 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cacna1aP97445 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cacna1aP97445 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cacna1aP97445 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cacna1aP97445 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cacna1aP97445 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cacna1aP97445 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cacna1aP97445 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cacna1aP97445 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cacna1aP97445 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cacna1aP97445 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cacna1aP97445 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cacna1aP97445 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cacna1aP97445 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cacna1aP97445 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cacna1aP97445 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cacna1aP97445 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cacna1aP97445 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cacna1aP97445 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cacna1aP97445 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cacna1aP97445 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cacna1aP97445 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cacna1aP97445 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cacna1aP97445 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cacna1aP97445 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cacna1aP97445 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cacna1aP97445 AA619741-201ENSMUST00000195095 646 ntBASIC13.4□□□□□ -0.26
Cacna1aP97445 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cacna1aP97445 Gm15823-201ENSMUST00000064305 670 ntBASIC13.4□□□□□ -0.26
Cacna1aP97445 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cacna1aP97445 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cacna1aP97445 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cacna1aP97445 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cacna1aP97445 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cacna1aP97445 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cacna1aP97445 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cacna1aP97445 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.4□□□□□ -0.26
Cacna1aP97445 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cacna1aP97445 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cacna1aP97445 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1aP97445 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1aP97445 Gm13226-201ENSMUST00000117838 404 ntBASIC13.39□□□□□ -0.27
Cacna1aP97445 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1aP97445 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.39□□□□□ -0.27
Cacna1aP97445 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.39□□□□□ -0.27
Cacna1aP97445 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1aP97445 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cacna1aP97445 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1aP97445 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1aP97445 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cacna1aP97445 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1aP97445 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1aP97445 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1aP97445 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1aP97445 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1aP97445 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cacna1aP97445 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cacna1aP97445 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1aP97445 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1aP97445 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1aP97445 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1aP97445 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.39□□□□□ -0.27
Cacna1aP97445 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Cacna1aP97445 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1aP97445 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1aP97445 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1aP97445 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cacna1aP97445 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cacna1aP97445 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cacna1aP97445 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1aP97445 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.39□□□□□ -0.27
Cacna1aP97445 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.39□□□□□ -0.27
Cacna1aP97445 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1aP97445 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cacna1aP97445 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1aP97445 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.39□□□□□ -0.27
Cacna1aP97445 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cacna1aP97445 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1aP97445 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cacna1aP97445 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cacna1aP97445 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1aP97445 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1aP97445 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1aP97445 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.38□□□□□ -0.27
Cacna1aP97445 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cacna1aP97445 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1aP97445 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1aP97445 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.38□□□□□ -0.27
Cacna1aP97445 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1aP97445 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1aP97445 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1aP97445 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.38□□□□□ -0.27
Cacna1aP97445 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1aP97445 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1aP97445 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms