Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h3bP84228 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h3bP84228 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h3bP84228 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h3bP84228 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Hist1h3bP84228 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h3bP84228 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.79□□□□□ -0.36
Hist1h3bP84228 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Hist1h3bP84228 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.79□□□□□ -0.36
Hist1h3bP84228 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h3bP84228 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.79□□□□□ -0.36
Hist1h3bP84228 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.79□□□□□ -0.36
Hist1h3bP84228 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.79□□□□□ -0.36
Hist1h3bP84228 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.79□□□□□ -0.36
Hist1h3bP84228 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hist1h3bP84228 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h3bP84228 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h3bP84228 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h3bP84228 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h3bP84228 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h3bP84228 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h3bP84228 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.78□□□□□ -0.36
Hist1h3bP84228 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.78□□□□□ -0.36
Hist1h3bP84228 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.78□□□□□ -0.36
Hist1h3bP84228 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h3bP84228 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.78□□□□□ -0.36
Hist1h3bP84228 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h3bP84228 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h3bP84228 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h3bP84228 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h3bP84228 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h3bP84228 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Hist1h3bP84228 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h3bP84228 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Hist1h3bP84228 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.78□□□□□ -0.36
Hist1h3bP84228 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h3bP84228 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Hist1h3bP84228 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h3bP84228 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Hist1h3bP84228 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.77□□□□□ -0.36
Hist1h3bP84228 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hist1h3bP84228 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hist1h3bP84228 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hist1h3bP84228 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hist1h3bP84228 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hist1h3bP84228 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hist1h3bP84228 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hist1h3bP84228 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Hist1h3bP84228 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Hist1h3bP84228 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hist1h3bP84228 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hist1h3bP84228 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hist1h3bP84228 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Hist1h3bP84228 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Hist1h3bP84228 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Hist1h3bP84228 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Hist1h3bP84228 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.77□□□□□ -0.37
Hist1h3bP84228 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hist1h3bP84228 Gm44492-201ENSMUST00000197012 141 ntBASIC12.77□□□□□ -0.37
Hist1h3bP84228 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hist1h3bP84228 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hist1h3bP84228 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.77□□□□□ -0.37
Hist1h3bP84228 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.77□□□□□ -0.37
Hist1h3bP84228 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hist1h3bP84228 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hist1h3bP84228 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hist1h3bP84228 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Hist1h3bP84228 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms