Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.12□□□□□ -0.47
Pdlim4P70271 Gm2756-201ENSMUST00000195851 400 ntBASIC12.12□□□□□ -0.47
Pdlim4P70271 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.12□□□□□ -0.47
Pdlim4P70271 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.12□□□□□ -0.47
Pdlim4P70271 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.12□□□□□ -0.47
Pdlim4P70271 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdlim4P70271 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdlim4P70271 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdlim4P70271 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.12□□□□□ -0.47
Pdlim4P70271 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pdlim4P70271 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pdlim4P70271 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdlim4P70271 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.12□□□□□ -0.47
Pdlim4P70271 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Pdlim4P70271 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.12□□□□□ -0.47
Pdlim4P70271 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pdlim4P70271 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdlim4P70271 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdlim4P70271 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pdlim4P70271 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdlim4P70271 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pdlim4P70271 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdlim4P70271 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pdlim4P70271 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdlim4P70271 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pdlim4P70271 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.11□□□□□ -0.47
Pdlim4P70271 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.11□□□□□ -0.47
Pdlim4P70271 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim4P70271 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim4P70271 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim4P70271 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Pdlim4P70271 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim4P70271 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Pdlim4P70271 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim4P70271 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim4P70271 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim4P70271 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim4P70271 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim4P70271 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim4P70271 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim4P70271 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim4P70271 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Pdlim4P70271 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pdlim4P70271 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.11□□□□□ -0.47
Pdlim4P70271 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Pdlim4P70271 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.11□□□□□ -0.47
Pdlim4P70271 Gm14822-201ENSMUST00000122247 291 ntBASIC12.11□□□□□ -0.47
Pdlim4P70271 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.11□□□□□ -0.47
Pdlim4P70271 Gm11025-201ENSMUST00000140773 466 ntBASIC12.11□□□□□ -0.47
Pdlim4P70271 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim4P70271 Gm25911-201ENSMUST00000157621 56 ntBASIC12.11□□□□□ -0.47
Pdlim4P70271 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim4P70271 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim4P70271 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.11□□□□□ -0.47
Pdlim4P70271 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.11□□□□□ -0.47
Pdlim4P70271 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim4P70271 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim4P70271 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim4P70271 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim4P70271 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim4P70271 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim4P70271 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim4P70271 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim4P70271 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pdlim4P70271 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim4P70271 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pdlim4P70271 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Pdlim4P70271 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.1□□□□□ -0.47
Pdlim4P70271 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Gm4995-201ENSMUST00000117247 432 ntBASIC12.1□□□□□ -0.47
Pdlim4P70271 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pdlim4P70271 Gm6736-201ENSMUST00000166583 948 ntBASIC12.1□□□□□ -0.47
Pdlim4P70271 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.1□□□□□ -0.47
Pdlim4P70271 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.1□□□□□ -0.47
Pdlim4P70271 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Pdlim4P70271 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pdlim4P70271 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Pdlim4P70271 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pdlim4P70271 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms