Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.74□□□□□ -0.21
Nup43P59235 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.74□□□□□ -0.21
Nup43P59235 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup43P59235 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.74□□□□□ -0.21
Nup43P59235 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup43P59235 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup43P59235 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup43P59235 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup43P59235 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup43P59235 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Nup43P59235 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup43P59235 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup43P59235 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Nup43P59235 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup43P59235 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.74□□□□□ -0.21
Nup43P59235 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup43P59235 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup43P59235 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Nup43P59235 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup43P59235 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup43P59235 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup43P59235 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup43P59235 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup43P59235 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup43P59235 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup43P59235 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.73□□□□□ -0.21
Nup43P59235 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup43P59235 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup43P59235 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Nup43P59235 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.73□□□□□ -0.21
Nup43P59235 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup43P59235 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup43P59235 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup43P59235 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.73□□□□□ -0.21
Nup43P59235 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup43P59235 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.73□□□□□ -0.21
Nup43P59235 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.73□□□□□ -0.21
Nup43P59235 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Nup43P59235 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.73□□□□□ -0.21
Nup43P59235 Gm43474-201ENSMUST00000196415 774 ntBASIC13.73□□□□□ -0.21
Nup43P59235 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup43P59235 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup43P59235 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup43P59235 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup43P59235 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.73□□□□□ -0.21
Nup43P59235 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup43P59235 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Nup43P59235 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup43P59235 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Nup43P59235 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.73□□□□□ -0.21
Nup43P59235 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup43P59235 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup43P59235 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Nup43P59235 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup43P59235 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nup43P59235 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup43P59235 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup43P59235 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup43P59235 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup43P59235 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup43P59235 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Nup43P59235 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup43P59235 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Nup43P59235 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup43P59235 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup43P59235 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.72□□□□□ -0.21
Nup43P59235 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nup43P59235 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup43P59235 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup43P59235 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup43P59235 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nup43P59235 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.72□□□□□ -0.21
Nup43P59235 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nup43P59235 Gm37444-201ENSMUST00000193605 439 ntBASIC13.72□□□□□ -0.21
Nup43P59235 Gm37230-201ENSMUST00000194491 818 ntBASIC13.72□□□□□ -0.21
Nup43P59235 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nup43P59235 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.72□□□□□ -0.21
Nup43P59235 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup43P59235 Gm5867-201ENSMUST00000063197 592 ntBASIC13.72□□□□□ -0.21
Nup43P59235 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Nup43P59235 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.72□□□□□ -0.21
Nup43P59235 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nup43P59235 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nup43P59235 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup43P59235 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup43P59235 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Nup43P59235 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nup43P59235 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup43P59235 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup43P59235 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nup43P59235 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Nup43P59235 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup43P59235 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup43P59235 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Nup43P59235 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup43P59235 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Nup43P59235 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.71□□□□□ -0.21
Nup43P59235 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.71□□□□□ -0.21
Nup43P59235 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.71□□□□□ -0.21
Nup43P59235 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms