Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.02□□□□□ -0.33
Abcd3P55096 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Abcd3P55096 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Abcd3P55096 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Abcd3P55096 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Abcd3P55096 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Abcd3P55096 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Abcd3P55096 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Abcd3P55096 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Abcd3P55096 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Abcd3P55096 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Abcd3P55096 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Abcd3P55096 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Abcd3P55096 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Abcd3P55096 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Abcd3P55096 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.02□□□□□ -0.33
Abcd3P55096 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Abcd3P55096 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Abcd3P55096 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Abcd3P55096 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Abcd3P55096 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Abcd3P55096 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Abcd3P55096 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Abcd3P55096 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Abcd3P55096 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Abcd3P55096 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Abcd3P55096 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Abcd3P55096 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Abcd3P55096 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Abcd3P55096 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Abcd3P55096 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Abcd3P55096 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Abcd3P55096 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abcd3P55096 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Abcd3P55096 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abcd3P55096 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abcd3P55096 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Abcd3P55096 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abcd3P55096 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abcd3P55096 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abcd3P55096 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Abcd3P55096 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abcd3P55096 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abcd3P55096 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abcd3P55096 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
Abcd3P55096 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.01□□□□□ -0.33
Abcd3P55096 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Abcd3P55096 Mir3113-201ENSMUST00000175478 76 ntBASIC13.01□□□□□ -0.33
Abcd3P55096 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.01□□□□□ -0.33
Abcd3P55096 Gm37230-201ENSMUST00000194491 818 ntBASIC13.01□□□□□ -0.33
Abcd3P55096 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.01□□□□□ -0.33
Abcd3P55096 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Abcd3P55096 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.01□□□□□ -0.33
Abcd3P55096 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abcd3P55096 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abcd3P55096 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abcd3P55096 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abcd3P55096 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Abcd3P55096 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abcd3P55096 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abcd3P55096 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abcd3P55096 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abcd3P55096 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Abcd3P55096 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abcd3P55096 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.01□□□□□ -0.33
Abcd3P55096 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abcd3P55096 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abcd3P55096 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Abcd3P55096 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abcd3P55096 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Abcd3P55096 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Abcd3P55096 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Abcd3P55096 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13□□□□□ -0.33
Abcd3P55096 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13□□□□□ -0.33
Abcd3P55096 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13□□□□□ -0.33
Abcd3P55096 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13□□□□□ -0.33
Abcd3P55096 Gm45683-201ENSMUST00000210825 1247 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms