Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nub1P54729 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
Nub1P54729 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nub1P54729 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Nub1P54729 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nub1P54729 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nub1P54729 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nub1P54729 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nub1P54729 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nub1P54729 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nub1P54729 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Nub1P54729 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Nub1P54729 Mir1895-201ENSMUST00000122615 79 ntBASIC15.65■□□□□ 0.1
Nub1P54729 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nub1P54729 Gm2756-201ENSMUST00000195851 400 ntBASIC15.65■□□□□ 0.1
Nub1P54729 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nub1P54729 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.65■□□□□ 0.1
Nub1P54729 Olfr286-202ENSMUST00000205305 969 ntBASIC15.65■□□□□ 0.1
Nub1P54729 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
Nub1P54729 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nub1P54729 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nub1P54729 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Nub1P54729 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nub1P54729 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nub1P54729 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Nub1P54729 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nub1P54729 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nub1P54729 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nub1P54729 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nub1P54729 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.64■□□□□ 0.09
Nub1P54729 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nub1P54729 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nub1P54729 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Nub1P54729 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.64■□□□□ 0.09
Nub1P54729 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nub1P54729 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.64■□□□□ 0.09
Nub1P54729 Gm5479-201ENSMUST00000160578 435 ntBASIC15.64■□□□□ 0.09
Nub1P54729 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.64■□□□□ 0.09
Nub1P54729 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.64■□□□□ 0.09
Nub1P54729 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nub1P54729 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.64■□□□□ 0.09
Nub1P54729 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.64■□□□□ 0.09
Nub1P54729 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.64■□□□□ 0.09
Nub1P54729 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nub1P54729 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nub1P54729 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nub1P54729 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nub1P54729 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nub1P54729 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nub1P54729 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
Nub1P54729 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nub1P54729 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nub1P54729 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nub1P54729 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Nub1P54729 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nub1P54729 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nub1P54729 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nub1P54729 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Nub1P54729 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Nub1P54729 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.63■□□□□ 0.09
Nub1P54729 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nub1P54729 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Nub1P54729 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nub1P54729 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nub1P54729 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.63■□□□□ 0.09
Nub1P54729 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nub1P54729 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nub1P54729 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.63■□□□□ 0.09
Nub1P54729 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.63■□□□□ 0.09
Nub1P54729 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nub1P54729 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Nub1P54729 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.63■□□□□ 0.09
Nub1P54729 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.63■□□□□ 0.09
Nub1P54729 Rprl2-201ENSMUST00000157150 290 ntBASIC15.63■□□□□ 0.09
Nub1P54729 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.63■□□□□ 0.09
Nub1P54729 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.63■□□□□ 0.09
Nub1P54729 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Nub1P54729 Gm43575-201ENSMUST00000196420 516 ntBASIC15.63■□□□□ 0.09
Nub1P54729 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.63■□□□□ 0.09
Nub1P54729 Chchd1-203ENSMUST00000224633 557 ntBASIC15.63■□□□□ 0.09
Nub1P54729 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nub1P54729 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.63■□□□□ 0.09
Nub1P54729 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nub1P54729 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Nub1P54729 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Nub1P54729 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Nub1P54729 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC15.63■□□□□ 0.09
Nub1P54729 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nub1P54729 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nub1P54729 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms