Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LtbrP50284 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LtbrP50284 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LtbrP50284 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LtbrP50284 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LtbrP50284 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LtbrP50284 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LtbrP50284 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LtbrP50284 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.04■□□□□ 0.32
LtbrP50284 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LtbrP50284 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LtbrP50284 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LtbrP50284 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.04■□□□□ 0.32
LtbrP50284 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LtbrP50284 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LtbrP50284 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LtbrP50284 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.04■□□□□ 0.32
LtbrP50284 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC17.04■□□□□ 0.32
LtbrP50284 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC17.04■□□□□ 0.32
LtbrP50284 AC155286.1-201ENSMUST00000218632 448 ntBASIC17.04■□□□□ 0.32
LtbrP50284 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.04■□□□□ 0.32
LtbrP50284 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LtbrP50284 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LtbrP50284 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LtbrP50284 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LtbrP50284 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LtbrP50284 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LtbrP50284 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LtbrP50284 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LtbrP50284 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LtbrP50284 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
LtbrP50284 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LtbrP50284 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LtbrP50284 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LtbrP50284 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LtbrP50284 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.03■□□□□ 0.32
LtbrP50284 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LtbrP50284 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LtbrP50284 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LtbrP50284 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.03■□□□□ 0.32
LtbrP50284 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LtbrP50284 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LtbrP50284 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LtbrP50284 Gm38116-201ENSMUST00000193873 1533 ntBASIC17.03■□□□□ 0.32
LtbrP50284 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.03■□□□□ 0.32
LtbrP50284 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LtbrP50284 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC17.03■□□□□ 0.32
LtbrP50284 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC17.03■□□□□ 0.32
LtbrP50284 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.03■□□□□ 0.32
LtbrP50284 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LtbrP50284 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC17.03■□□□□ 0.32
LtbrP50284 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LtbrP50284 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
LtbrP50284 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
LtbrP50284 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LtbrP50284 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LtbrP50284 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LtbrP50284 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LtbrP50284 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LtbrP50284 Gm9200-201ENSMUST00000118513 1354 ntBASIC17.02■□□□□ 0.32
LtbrP50284 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LtbrP50284 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.02■□□□□ 0.32
LtbrP50284 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
LtbrP50284 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LtbrP50284 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.02■□□□□ 0.32
LtbrP50284 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LtbrP50284 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LtbrP50284 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LtbrP50284 AC114008.2-201ENSMUST00000227699 1347 ntBASIC17.02■□□□□ 0.32
LtbrP50284 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
LtbrP50284 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
LtbrP50284 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LtbrP50284 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LtbrP50284 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LtbrP50284 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LtbrP50284 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC17.02■□□□□ 0.32
LtbrP50284 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.02■□□□□ 0.32
LtbrP50284 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC17.02■□□□□ 0.32
LtbrP50284 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC17.02■□□□□ 0.32
LtbrP50284 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LtbrP50284 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.02■□□□□ 0.32
LtbrP50284 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LtbrP50284 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LtbrP50284 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC17.02■□□□□ 0.32
LtbrP50284 Dupd1-202ENSMUST00000224735 548 ntBASIC17.02■□□□□ 0.32
LtbrP50284 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LtbrP50284 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LtbrP50284 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.02■□□□□ 0.31
LtbrP50284 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.02■□□□□ 0.31
LtbrP50284 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LtbrP50284 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.02■□□□□ 0.31
LtbrP50284 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LtbrP50284 Gm37744-201ENSMUST00000194616 1590 ntBASIC17.02■□□□□ 0.31
LtbrP50284 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LtbrP50284 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LtbrP50284 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LtbrP50284 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LtbrP50284 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LtbrP50284 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.01■□□□□ 0.31
LtbrP50284 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms