Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-1P50220 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-1P50220 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-1P50220 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Gm17807-201ENSMUST00000186869 298 ntBASIC12.07□□□□□ -0.48
Nkx2-1P50220 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.07□□□□□ -0.48
Nkx2-1P50220 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.07□□□□□ -0.48
Nkx2-1P50220 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.07□□□□□ -0.48
Nkx2-1P50220 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.07□□□□□ -0.48
Nkx2-1P50220 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.07□□□□□ -0.48
Nkx2-1P50220 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-1P50220 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-1P50220 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-1P50220 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-1P50220 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Nkx2-1P50220 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-1P50220 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-1P50220 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-1P50220 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-1P50220 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-1P50220 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-1P50220 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-1P50220 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.06□□□□□ -0.48
Nkx2-1P50220 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nkx2-1P50220 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.06□□□□□ -0.48
Nkx2-1P50220 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.06□□□□□ -0.48
Nkx2-1P50220 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nkx2-1P50220 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-1P50220 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-1P50220 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.06□□□□□ -0.48
Nkx2-1P50220 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-1P50220 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.06□□□□□ -0.48
Nkx2-1P50220 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-1P50220 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.06□□□□□ -0.48
Nkx2-1P50220 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-1P50220 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-1P50220 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-1P50220 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-1P50220 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-1P50220 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Nkx2-1P50220 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.06□□□□□ -0.48
Nkx2-1P50220 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.05□□□□□ -0.48
Nkx2-1P50220 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms