Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps4bP46467 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps4bP46467 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.77□□□□□ -0.05
Vps4bP46467 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.76□□□□□ -0.05
Vps4bP46467 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Gm11779-201ENSMUST00000118541 368 ntBASIC14.76□□□□□ -0.05
Vps4bP46467 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.76□□□□□ -0.05
Vps4bP46467 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.76□□□□□ -0.05
Vps4bP46467 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.76□□□□□ -0.05
Vps4bP46467 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.76□□□□□ -0.05
Vps4bP46467 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.76□□□□□ -0.05
Vps4bP46467 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.76□□□□□ -0.05
Vps4bP46467 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Vps4bP46467 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.76□□□□□ -0.05
Vps4bP46467 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Vps4bP46467 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Vps4bP46467 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Vps4bP46467 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Vps4bP46467 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps4bP46467 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4bP46467 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4bP46467 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4bP46467 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4bP46467 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4bP46467 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
Vps4bP46467 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4bP46467 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4bP46467 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4bP46467 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Vps4bP46467 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4bP46467 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4bP46467 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4bP46467 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
Vps4bP46467 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.75□□□□□ -0.05
Vps4bP46467 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.75□□□□□ -0.05
Vps4bP46467 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Vps4bP46467 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.75□□□□□ -0.05
Vps4bP46467 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.75□□□□□ -0.05
Vps4bP46467 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4bP46467 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4bP46467 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4bP46467 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4bP46467 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4bP46467 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4bP46467 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Vps4bP46467 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4bP46467 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4bP46467 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4bP46467 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4bP46467 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4bP46467 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Vps4bP46467 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps4bP46467 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.75□□□□□ -0.05
Vps4bP46467 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps4bP46467 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps4bP46467 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.74□□□□□ -0.05
Vps4bP46467 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps4bP46467 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps4bP46467 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps4bP46467 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps4bP46467 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps4bP46467 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.74□□□□□ -0.05
Vps4bP46467 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps4bP46467 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms