Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Sdc2P43407 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc2P43407 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc2P43407 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc2P43407 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc2P43407 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc2P43407 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc2P43407 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.33■□□□□ 0.2
Sdc2P43407 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc2P43407 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc2P43407 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc2P43407 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc2P43407 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc2P43407 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc2P43407 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.32■□□□□ 0.2
Sdc2P43407 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc2P43407 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc2P43407 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Sdc2P43407 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Sdc2P43407 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc2P43407 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc2P43407 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.32■□□□□ 0.2
Sdc2P43407 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc2P43407 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc2P43407 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc2P43407 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.32■□□□□ 0.2
Sdc2P43407 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc2P43407 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc2P43407 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc2P43407 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc2P43407 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc2P43407 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc2P43407 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc2P43407 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc2P43407 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc2P43407 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc2P43407 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.32■□□□□ 0.2
Sdc2P43407 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc2P43407 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc2P43407 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC16.32■□□□□ 0.2
Sdc2P43407 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc2P43407 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
Sdc2P43407 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc2P43407 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Sdc2P43407 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc2P43407 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc2P43407 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc2P43407 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Sdc2P43407 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc2P43407 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Sdc2P43407 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc2P43407 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc2P43407 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc2P43407 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.31■□□□□ 0.2
Sdc2P43407 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc2P43407 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc2P43407 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc2P43407 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sdc2P43407 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc2P43407 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc2P43407 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sdc2P43407 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.31■□□□□ 0.2
Sdc2P43407 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc2P43407 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc2P43407 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.31■□□□□ 0.2
Sdc2P43407 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc2P43407 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc2P43407 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc2P43407 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Sdc2P43407 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Sdc2P43407 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc2P43407 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc2P43407 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc2P43407 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sdc2P43407 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc2P43407 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.31■□□□□ 0.2
Sdc2P43407 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc2P43407 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc2P43407 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc2P43407 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.3■□□□□ 0.2
Sdc2P43407 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc2P43407 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc2P43407 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Sdc2P43407 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc2P43407 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Sdc2P43407 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc2P43407 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc2P43407 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.3■□□□□ 0.2
Sdc2P43407 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc2P43407 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc2P43407 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.3■□□□□ 0.2
Sdc2P43407 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc2P43407 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.3■□□□□ 0.2
Sdc2P43407 Gm2451-201ENSMUST00000199447 999 ntBASIC16.3■□□□□ 0.2
Sdc2P43407 Gm10290-201ENSMUST00000200451 999 ntBASIC16.3■□□□□ 0.2
Sdc2P43407 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.3■□□□□ 0.2
Sdc2P43407 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.3■□□□□ 0.2
Sdc2P43407 Gm10154-201ENSMUST00000084445 354 ntBASIC16.3■□□□□ 0.2
Sdc2P43407 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc2P43407 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms