Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abca1P41233 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Abca1P41233 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Abca1P41233 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.12□□□□□ -0.47
Abca1P41233 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Abca1P41233 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Abca1P41233 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abca1P41233 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.12□□□□□ -0.47
Abca1P41233 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Abca1P41233 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abca1P41233 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.12□□□□□ -0.47
Abca1P41233 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abca1P41233 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.12□□□□□ -0.47
Abca1P41233 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abca1P41233 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.12□□□□□ -0.47
Abca1P41233 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abca1P41233 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abca1P41233 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Abca1P41233 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.12□□□□□ -0.47
Abca1P41233 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abca1P41233 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.12□□□□□ -0.47
Abca1P41233 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Abca1P41233 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Abca1P41233 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abca1P41233 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abca1P41233 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Abca1P41233 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abca1P41233 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abca1P41233 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Abca1P41233 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abca1P41233 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abca1P41233 Gm38225-201ENSMUST00000194001 393 ntBASIC12.12□□□□□ -0.47
Abca1P41233 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.12□□□□□ -0.47
Abca1P41233 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abca1P41233 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Abca1P41233 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abca1P41233 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abca1P41233 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abca1P41233 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abca1P41233 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Abca1P41233 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Abca1P41233 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.11□□□□□ -0.47
Abca1P41233 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.11□□□□□ -0.47
Abca1P41233 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.11□□□□□ -0.47
Abca1P41233 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.11□□□□□ -0.47
Abca1P41233 Gm10499-201ENSMUST00000174094 934 ntBASIC12.11□□□□□ -0.47
Abca1P41233 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.11□□□□□ -0.47
Abca1P41233 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Gm28631-201ENSMUST00000190740 334 ntBASIC12.11□□□□□ -0.47
Abca1P41233 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.11□□□□□ -0.47
Abca1P41233 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.11□□□□□ -0.47
Abca1P41233 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Abca1P41233 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.11□□□□□ -0.47
Abca1P41233 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.11□□□□□ -0.47
Abca1P41233 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.11□□□□□ -0.47
Abca1P41233 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Abca1P41233 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.11□□□□□ -0.47
Abca1P41233 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.11□□□□□ -0.47
Abca1P41233 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.11□□□□□ -0.47
Abca1P41233 Gm9063-201ENSMUST00000223299 582 ntBASIC12.11□□□□□ -0.47
Abca1P41233 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abca1P41233 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Abca1P41233 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.11□□□□□ -0.47
Abca1P41233 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Abca1P41233 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abca1P41233 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Abca1P41233 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abca1P41233 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.1□□□□□ -0.47
Abca1P41233 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Abca1P41233 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abca1P41233 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms