Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Gm8749-201ENSMUST00000117737 331 ntBASIC14.1□□□□□ -0.15
TfamP40630 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.1□□□□□ -0.15
TfamP40630 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TfamP40630 Gm9726-201ENSMUST00000180321 678 ntBASIC14.1□□□□□ -0.15
TfamP40630 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TfamP40630 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TfamP40630 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.1□□□□□ -0.15
TfamP40630 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
TfamP40630 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.1□□□□□ -0.15
TfamP40630 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.1□□□□□ -0.15
TfamP40630 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TfamP40630 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TfamP40630 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TfamP40630 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TfamP40630 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TfamP40630 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.1□□□□□ -0.15
TfamP40630 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TfamP40630 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TfamP40630 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TfamP40630 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TfamP40630 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
TfamP40630 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TfamP40630 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TfamP40630 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TfamP40630 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TfamP40630 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TfamP40630 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TfamP40630 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TfamP40630 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TfamP40630 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.09□□□□□ -0.15
TfamP40630 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TfamP40630 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TfamP40630 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TfamP40630 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TfamP40630 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TfamP40630 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TfamP40630 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TfamP40630 Gm13464-201ENSMUST00000119418 935 ntBASIC14.09□□□□□ -0.15
TfamP40630 Gm12350-201ENSMUST00000121208 462 ntBASIC14.09□□□□□ -0.15
TfamP40630 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TfamP40630 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.09□□□□□ -0.15
TfamP40630 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.09□□□□□ -0.15
TfamP40630 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.09□□□□□ -0.15
TfamP40630 Gm2272-201ENSMUST00000194903 582 ntBASIC14.09□□□□□ -0.15
TfamP40630 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.09□□□□□ -0.15
TfamP40630 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TfamP40630 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TfamP40630 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TfamP40630 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.09□□□□□ -0.15
TfamP40630 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.09□□□□□ -0.15
TfamP40630 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TfamP40630 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.09□□□□□ -0.15
TfamP40630 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TfamP40630 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TfamP40630 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TfamP40630 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TfamP40630 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TfamP40630 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TfamP40630 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TfamP40630 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.09□□□□□ -0.15
TfamP40630 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TfamP40630 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TfamP40630 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TfamP40630 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TfamP40630 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TfamP40630 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TfamP40630 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TfamP40630 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.08□□□□□ -0.16
TfamP40630 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.08□□□□□ -0.16
TfamP40630 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TfamP40630 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TfamP40630 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TfamP40630 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms