Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col18a1P39061 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.92■□□□□ 0.62
Col18a1P39061 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col18a1P39061 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col18a1P39061 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col18a1P39061 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col18a1P39061 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col18a1P39061 Gm11400-201ENSMUST00000120853 1214 ntBASIC18.92■□□□□ 0.62
Col18a1P39061 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC18.92■□□□□ 0.62
Col18a1P39061 Gm27341-201ENSMUST00000183570 106 ntBASIC18.92■□□□□ 0.62
Col18a1P39061 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col18a1P39061 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col18a1P39061 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col18a1P39061 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col18a1P39061 Gm14780-201ENSMUST00000118387 2737 ntBASIC18.92■□□□□ 0.62
Col18a1P39061 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col18a1P39061 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col18a1P39061 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col18a1P39061 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col18a1P39061 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.92■□□□□ 0.62
Col18a1P39061 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col18a1P39061 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col18a1P39061 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col18a1P39061 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col18a1P39061 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col18a1P39061 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC18.91■□□□□ 0.62
Col18a1P39061 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col18a1P39061 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col18a1P39061 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Col18a1P39061 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col18a1P39061 Gm2606-201ENSMUST00000100754 1002 ntBASIC18.91■□□□□ 0.62
Col18a1P39061 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC18.91■□□□□ 0.62
Col18a1P39061 Gm12537-201ENSMUST00000119266 1002 ntBASIC18.91■□□□□ 0.62
Col18a1P39061 Gm12070-201ENSMUST00000119551 1002 ntBASIC18.91■□□□□ 0.62
Col18a1P39061 Gm12671-201ENSMUST00000119978 1002 ntBASIC18.91■□□□□ 0.62
Col18a1P39061 Gm13292-201ENSMUST00000120014 1000 ntBASIC18.91■□□□□ 0.62
Col18a1P39061 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC18.91■□□□□ 0.62
Col18a1P39061 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC18.91■□□□□ 0.62
Col18a1P39061 Gm10359-201ENSMUST00000180167 1002 ntBASIC18.91■□□□□ 0.62
Col18a1P39061 Gm12033-201ENSMUST00000180654 1002 ntBASIC18.91■□□□□ 0.62
Col18a1P39061 Gm5559-201ENSMUST00000180755 1002 ntBASIC18.91■□□□□ 0.62
Col18a1P39061 Gm6222-202ENSMUST00000182143 629 ntBASIC18.91■□□□□ 0.62
Col18a1P39061 Gm7293-201ENSMUST00000216682 1007 ntBASIC18.91■□□□□ 0.62
Col18a1P39061 Gm24447-201ENSMUST00000083977 338 ntBASIC18.91■□□□□ 0.62
Col18a1P39061 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col18a1P39061 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC18.91■□□□□ 0.62
Col18a1P39061 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col18a1P39061 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col18a1P39061 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col18a1P39061 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col18a1P39061 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col18a1P39061 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.91■□□□□ 0.62
Col18a1P39061 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC18.91■□□□□ 0.62
Col18a1P39061 Gm13369-201ENSMUST00000119442 987 ntBASIC18.91■□□□□ 0.62
Col18a1P39061 Gm13297-201ENSMUST00000120205 934 ntBASIC18.91■□□□□ 0.62
Col18a1P39061 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Col18a1P39061 Gm16505-201ENSMUST00000179981 232 ntBASIC18.91■□□□□ 0.62
Col18a1P39061 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col18a1P39061 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col18a1P39061 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col18a1P39061 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC18.9■□□□□ 0.62
Col18a1P39061 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col18a1P39061 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col18a1P39061 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col18a1P39061 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col18a1P39061 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Col18a1P39061 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC18.9■□□□□ 0.62
Col18a1P39061 Gm20482-202ENSMUST00000174729 825 ntBASIC18.9■□□□□ 0.62
Col18a1P39061 Gm42550-201ENSMUST00000201553 960 ntBASIC18.9■□□□□ 0.62
Col18a1P39061 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col18a1P39061 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col18a1P39061 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col18a1P39061 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col18a1P39061 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Col18a1P39061 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Col18a1P39061 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Col18a1P39061 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Col18a1P39061 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC18.89■□□□□ 0.62
Col18a1P39061 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.89■□□□□ 0.62
Col18a1P39061 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Col18a1P39061 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col18a1P39061 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC18.89■□□□□ 0.61
Col18a1P39061 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col18a1P39061 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC18.89■□□□□ 0.61
Col18a1P39061 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Col18a1P39061 Gm45186-201ENSMUST00000206874 478 ntBASIC18.89■□□□□ 0.61
Col18a1P39061 Gm29787-201ENSMUST00000222129 849 ntBASIC18.89■□□□□ 0.61
Col18a1P39061 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col18a1P39061 Gm10146-201ENSMUST00000072739 309 ntBASIC18.89■□□□□ 0.61
Col18a1P39061 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col18a1P39061 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col18a1P39061 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col18a1P39061 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col18a1P39061 Gm9109-201ENSMUST00000120254 1405 ntBASIC18.89■□□□□ 0.61
Col18a1P39061 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col18a1P39061 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col18a1P39061 AC153366.2-201ENSMUST00000219461 1984 ntBASIC18.89■□□□□ 0.61
Col18a1P39061 Gm15370-201ENSMUST00000117158 253 ntBASIC18.88■□□□□ 0.61
Col18a1P39061 Gm13123-201ENSMUST00000122173 492 ntBASIC18.88■□□□□ 0.61
Col18a1P39061 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 210.5 ms