Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk2P38575 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Upk2P38575 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk2P38575 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Upk2P38575 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Upk2P38575 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Upk2P38575 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk2P38575 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk2P38575 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.76□□□□□ -0.37
Upk2P38575 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Upk2P38575 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk2P38575 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.76□□□□□ -0.37
Upk2P38575 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Upk2P38575 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk2P38575 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.76□□□□□ -0.37
Upk2P38575 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Upk2P38575 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk2P38575 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk2P38575 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk2P38575 Gm6973-201ENSMUST00000117080 721 ntBASIC12.76□□□□□ -0.37
Upk2P38575 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Upk2P38575 Gm11543-201ENSMUST00000120758 370 ntBASIC12.76□□□□□ -0.37
Upk2P38575 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.76□□□□□ -0.37
Upk2P38575 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk2P38575 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk2P38575 Gm10175-201ENSMUST00000086013 645 ntBASIC12.76□□□□□ -0.37
Upk2P38575 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk2P38575 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk2P38575 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.76□□□□□ -0.37
Upk2P38575 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk2P38575 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk2P38575 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk2P38575 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk2P38575 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Upk2P38575 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk2P38575 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk2P38575 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk2P38575 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Upk2P38575 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.76□□□□□ -0.37
Upk2P38575 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk2P38575 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk2P38575 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Upk2P38575 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Upk2P38575 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk2P38575 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk2P38575 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Upk2P38575 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk2P38575 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.75□□□□□ -0.37
Upk2P38575 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Upk2P38575 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.75□□□□□ -0.37
Upk2P38575 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.75□□□□□ -0.37
Upk2P38575 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.75□□□□□ -0.37
Upk2P38575 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Upk2P38575 Gm11025-201ENSMUST00000140773 466 ntBASIC12.75□□□□□ -0.37
Upk2P38575 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk2P38575 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Upk2P38575 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Upk2P38575 Gm27525-201ENSMUST00000184465 107 ntBASIC12.75□□□□□ -0.37
Upk2P38575 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.75□□□□□ -0.37
Upk2P38575 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk2P38575 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Upk2P38575 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk2P38575 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk2P38575 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.75□□□□□ -0.37
Upk2P38575 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk2P38575 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.75□□□□□ -0.37
Upk2P38575 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk2P38575 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk2P38575 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk2P38575 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.75□□□□□ -0.37
Upk2P38575 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Upk2P38575 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Upk2P38575 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk2P38575 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk2P38575 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Upk2P38575 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Upk2P38575 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk2P38575 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk2P38575 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.74□□□□□ -0.37
Upk2P38575 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk2P38575 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk2P38575 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk2P38575 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk2P38575 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk2P38575 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk2P38575 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.74□□□□□ -0.37
Upk2P38575 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk2P38575 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk2P38575 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk2P38575 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk2P38575 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk2P38575 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk2P38575 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk2P38575 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Upk2P38575 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk2P38575 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk2P38575 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk2P38575 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk2P38575 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.74□□□□□ -0.37
Upk2P38575 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms