Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.46□□□□□ -0.26
Foxa1P35582 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Foxa1P35582 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.46□□□□□ -0.26
Foxa1P35582 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Foxa1P35582 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Foxa1P35582 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Foxa1P35582 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Foxa1P35582 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Foxa1P35582 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Foxa1P35582 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Foxa1P35582 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Foxa1P35582 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Foxa1P35582 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Foxa1P35582 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Foxa1P35582 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.45□□□□□ -0.26
Foxa1P35582 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Foxa1P35582 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Foxa1P35582 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Foxa1P35582 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Foxa1P35582 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Foxa1P35582 Gm23935-201ENSMUST00000102303 57 ntBASIC13.45□□□□□ -0.26
Foxa1P35582 Gm24270-201ENSMUST00000102326 57 ntBASIC13.45□□□□□ -0.26
Foxa1P35582 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.45□□□□□ -0.26
Foxa1P35582 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.45□□□□□ -0.26
Foxa1P35582 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Foxa1P35582 Gm24245-201ENSMUST00000157318 57 ntBASIC13.45□□□□□ -0.26
Foxa1P35582 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.45□□□□□ -0.26
Foxa1P35582 Gm38225-201ENSMUST00000194001 393 ntBASIC13.45□□□□□ -0.26
Foxa1P35582 Gm43125-201ENSMUST00000201724 730 ntBASIC13.45□□□□□ -0.26
Foxa1P35582 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Foxa1P35582 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Foxa1P35582 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Foxa1P35582 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Foxa1P35582 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Foxa1P35582 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Foxa1P35582 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Foxa1P35582 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.45□□□□□ -0.26
Foxa1P35582 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Foxa1P35582 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.45□□□□□ -0.26
Foxa1P35582 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Foxa1P35582 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Foxa1P35582 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Foxa1P35582 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Foxa1P35582 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Foxa1P35582 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.45□□□□□ -0.26
Foxa1P35582 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Foxa1P35582 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Foxa1P35582 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Foxa1P35582 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Foxa1P35582 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.44□□□□□ -0.26
Foxa1P35582 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxa1P35582 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxa1P35582 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Foxa1P35582 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.44□□□□□ -0.26
Foxa1P35582 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxa1P35582 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.44□□□□□ -0.26
Foxa1P35582 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxa1P35582 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Foxa1P35582 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxa1P35582 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxa1P35582 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxa1P35582 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Foxa1P35582 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.44□□□□□ -0.26
Foxa1P35582 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.44□□□□□ -0.26
Foxa1P35582 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Foxa1P35582 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.44□□□□□ -0.26
Foxa1P35582 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxa1P35582 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxa1P35582 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxa1P35582 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxa1P35582 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxa1P35582 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Foxa1P35582 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxa1P35582 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxa1P35582 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Foxa1P35582 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxa1P35582 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxa1P35582 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Foxa1P35582 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Foxa1P35582 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxa1P35582 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Foxa1P35582 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxa1P35582 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.44□□□□□ -0.26
Foxa1P35582 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Foxa1P35582 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxa1P35582 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.43□□□□□ -0.26
Foxa1P35582 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxa1P35582 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxa1P35582 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxa1P35582 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxa1P35582 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Foxa1P35582 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.43□□□□□ -0.26
Foxa1P35582 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxa1P35582 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Foxa1P35582 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.43□□□□□ -0.26
Foxa1P35582 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.43□□□□□ -0.26
Foxa1P35582 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.43□□□□□ -0.26
Foxa1P35582 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.43□□□□□ -0.26
Foxa1P35582 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.43□□□□□ -0.26
Foxa1P35582 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms