Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Nedd8P29595 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
Nedd8P29595 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nedd8P29595 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Nedd8P29595 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nedd8P29595 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nedd8P29595 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nedd8P29595 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nedd8P29595 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.45□□□□□ -0.26
Nedd8P29595 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nedd8P29595 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nedd8P29595 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nedd8P29595 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nedd8P29595 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nedd8P29595 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nedd8P29595 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nedd8P29595 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Nedd8P29595 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nedd8P29595 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nedd8P29595 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.45□□□□□ -0.26
Nedd8P29595 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.45□□□□□ -0.26
Nedd8P29595 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.45□□□□□ -0.26
Nedd8P29595 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nedd8P29595 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nedd8P29595 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nedd8P29595 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.45□□□□□ -0.26
Nedd8P29595 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nedd8P29595 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nedd8P29595 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Nedd8P29595 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nedd8P29595 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.45□□□□□ -0.26
Nedd8P29595 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.45□□□□□ -0.26
Nedd8P29595 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Nedd8P29595 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.44□□□□□ -0.26
Nedd8P29595 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Nedd8P29595 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Nedd8P29595 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Nedd8P29595 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.44□□□□□ -0.26
Nedd8P29595 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Nedd8P29595 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.44□□□□□ -0.26
Nedd8P29595 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nedd8P29595 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.43□□□□□ -0.26
Nedd8P29595 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.43□□□□□ -0.26
Nedd8P29595 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nedd8P29595 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nedd8P29595 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nedd8P29595 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nedd8P29595 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nedd8P29595 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.43□□□□□ -0.26
Nedd8P29595 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nedd8P29595 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nedd8P29595 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nedd8P29595 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nedd8P29595 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nedd8P29595 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.43□□□□□ -0.26
Nedd8P29595 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nedd8P29595 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nedd8P29595 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nedd8P29595 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nedd8P29595 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nedd8P29595 Gm27011-201ENSMUST00000182352 972 ntBASIC13.43□□□□□ -0.26
Nedd8P29595 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.43□□□□□ -0.26
Nedd8P29595 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.43□□□□□ -0.26
Nedd8P29595 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nedd8P29595 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nedd8P29595 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nedd8P29595 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nedd8P29595 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
Nedd8P29595 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nedd8P29595 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nedd8P29595 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nedd8P29595 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms