Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cd40lgP27548 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cd40lgP27548 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cd40lgP27548 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.44□□□□□ -0.26
Cd40lgP27548 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cd40lgP27548 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cd40lgP27548 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cd40lgP27548 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cd40lgP27548 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cd40lgP27548 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cd40lgP27548 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.43□□□□□ -0.26
Cd40lgP27548 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.43□□□□□ -0.26
Cd40lgP27548 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.43□□□□□ -0.26
Cd40lgP27548 Gm45747-201ENSMUST00000212203 999 ntBASIC13.43□□□□□ -0.26
Cd40lgP27548 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cd40lgP27548 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cd40lgP27548 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cd40lgP27548 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cd40lgP27548 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cd40lgP27548 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Cd40lgP27548 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cd40lgP27548 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cd40lgP27548 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cd40lgP27548 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cd40lgP27548 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Cd40lgP27548 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cd40lgP27548 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.43□□□□□ -0.26
Cd40lgP27548 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cd40lgP27548 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Cd40lgP27548 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40lgP27548 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40lgP27548 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.42□□□□□ -0.26
Cd40lgP27548 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Cd40lgP27548 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cd40lgP27548 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.42□□□□□ -0.26
Cd40lgP27548 Celf4-206ENSMUST00000224553 1729 ntBASIC13.42□□□□□ -0.26
Cd40lgP27548 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40lgP27548 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40lgP27548 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40lgP27548 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40lgP27548 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40lgP27548 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cd40lgP27548 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40lgP27548 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.42□□□□□ -0.26
Cd40lgP27548 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40lgP27548 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40lgP27548 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.42□□□□□ -0.26
Cd40lgP27548 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Cd40lgP27548 Gm11025-201ENSMUST00000140773 466 ntBASIC13.42□□□□□ -0.26
Cd40lgP27548 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.42□□□□□ -0.26
Cd40lgP27548 Gm17968-201ENSMUST00000194902 784 ntBASIC13.42□□□□□ -0.26
Cd40lgP27548 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Cd40lgP27548 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.42□□□□□ -0.26
Cd40lgP27548 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40lgP27548 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40lgP27548 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40lgP27548 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40lgP27548 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.42□□□□□ -0.26
Cd40lgP27548 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40lgP27548 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40lgP27548 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.42□□□□□ -0.26
Cd40lgP27548 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40lgP27548 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40lgP27548 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40lgP27548 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40lgP27548 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Cd40lgP27548 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40lgP27548 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40lgP27548 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40lgP27548 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.42□□□□□ -0.26
Cd40lgP27548 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40lgP27548 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40lgP27548 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40lgP27548 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Cd40lgP27548 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40lgP27548 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40lgP27548 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40lgP27548 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cd40lgP27548 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40lgP27548 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40lgP27548 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40lgP27548 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40lgP27548 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40lgP27548 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cd40lgP27548 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cd40lgP27548 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40lgP27548 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Cd40lgP27548 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Cd40lgP27548 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40lgP27548 Gm26308-201ENSMUST00000157768 69 ntBASIC13.41□□□□□ -0.26
Cd40lgP27548 Gm27494-201ENSMUST00000184735 189 ntBASIC13.41□□□□□ -0.26
Cd40lgP27548 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.41□□□□□ -0.26
Cd40lgP27548 Gm43575-201ENSMUST00000196420 516 ntBASIC13.41□□□□□ -0.26
Cd40lgP27548 Gm43767-201ENSMUST00000198933 381 ntBASIC13.41□□□□□ -0.26
Cd40lgP27548 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cd40lgP27548 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.41□□□□□ -0.26
Cd40lgP27548 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40lgP27548 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40lgP27548 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40lgP27548 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms