Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prim1P20664 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prim1P20664 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Prim1P20664 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prim1P20664 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Prim1P20664 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Prim1P20664 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Prim1P20664 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Prim1P20664 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prim1P20664 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC18.47■□□□□ 0.55
Prim1P20664 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prim1P20664 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prim1P20664 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Prim1P20664 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Prim1P20664 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prim1P20664 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prim1P20664 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC18.47■□□□□ 0.55
Prim1P20664 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Prim1P20664 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Prim1P20664 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prim1P20664 AC238811.1-201ENSMUST00000225302 441 ntBASIC18.47■□□□□ 0.55
Prim1P20664 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prim1P20664 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prim1P20664 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.47■□□□□ 0.55
Prim1P20664 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prim1P20664 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prim1P20664 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prim1P20664 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prim1P20664 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Prim1P20664 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prim1P20664 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prim1P20664 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prim1P20664 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prim1P20664 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Prim1P20664 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC18.46■□□□□ 0.55
Prim1P20664 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prim1P20664 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Prim1P20664 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prim1P20664 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prim1P20664 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prim1P20664 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Prim1P20664 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Prim1P20664 H2-Pa-201ENSMUST00000182803 626 ntBASIC18.46■□□□□ 0.55
Prim1P20664 Thoc7-209ENSMUST00000225325 765 ntBASIC18.46■□□□□ 0.55
Prim1P20664 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prim1P20664 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.46■□□□□ 0.55
Prim1P20664 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prim1P20664 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prim1P20664 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prim1P20664 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC18.46■□□□□ 0.55
Prim1P20664 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prim1P20664 Gm9768-201ENSMUST00000206007 2861 ntBASIC18.46■□□□□ 0.55
Prim1P20664 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Prim1P20664 Syt7-205ENSMUST00000224135 1557 ntBASIC18.46■□□□□ 0.55
Prim1P20664 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prim1P20664 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prim1P20664 Gm45667-201ENSMUST00000210380 1316 ntBASIC18.46■□□□□ 0.55
Prim1P20664 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC18.46■□□□□ 0.55
Prim1P20664 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Prim1P20664 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prim1P20664 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Prim1P20664 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Prim1P20664 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prim1P20664 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC18.45■□□□□ 0.54
Prim1P20664 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Prim1P20664 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prim1P20664 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Prim1P20664 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prim1P20664 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Prim1P20664 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Prim1P20664 Gm23547-201ENSMUST00000158210 271 ntBASIC18.45■□□□□ 0.54
Prim1P20664 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Prim1P20664 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Prim1P20664 Gm6218-201ENSMUST00000219812 628 ntBASIC18.45■□□□□ 0.54
Prim1P20664 AC121598.1-201ENSMUST00000228224 1019 ntBASIC18.45■□□□□ 0.54
Prim1P20664 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prim1P20664 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prim1P20664 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prim1P20664 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prim1P20664 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Prim1P20664 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prim1P20664 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prim1P20664 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Prim1P20664 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Prim1P20664 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Prim1P20664 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Prim1P20664 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
Prim1P20664 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Prim1P20664 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prim1P20664 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Prim1P20664 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Prim1P20664 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Prim1P20664 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prim1P20664 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Prim1P20664 Gm38230-201ENSMUST00000193572 1159 ntBASIC18.44■□□□□ 0.54
Prim1P20664 Gm6916-202ENSMUST00000205523 195 ntBASIC18.44■□□□□ 0.54
Prim1P20664 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prim1P20664 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prim1P20664 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Prim1P20664 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms