Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.05□□□□□ -0.48
Cxcl1P12850 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.05□□□□□ -0.48
Cxcl1P12850 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.05□□□□□ -0.48
Cxcl1P12850 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.05□□□□□ -0.48
Cxcl1P12850 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.05□□□□□ -0.48
Cxcl1P12850 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.05□□□□□ -0.48
Cxcl1P12850 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 Gm18669-201ENSMUST00000216049 778 ntBASIC12.05□□□□□ -0.48
Cxcl1P12850 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cxcl1P12850 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cxcl1P12850 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cxcl1P12850 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.05□□□□□ -0.48
Cxcl1P12850 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cxcl1P12850 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.05□□□□□ -0.48
Cxcl1P12850 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cxcl1P12850 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Cxcl1P12850 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cxcl1P12850 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl1P12850 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.05□□□□□ -0.48
Cxcl1P12850 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cxcl1P12850 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.04□□□□□ -0.48
Cxcl1P12850 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Cxcl1P12850 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Cxcl1P12850 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Cxcl1P12850 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cxcl1P12850 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.04□□□□□ -0.48
Cxcl1P12850 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Cxcl1P12850 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.04□□□□□ -0.48
Cxcl1P12850 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl1P12850 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cxcl1P12850 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Cxcl1P12850 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cxcl1P12850 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.03□□□□□ -0.48
Cxcl1P12850 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.03□□□□□ -0.48
Cxcl1P12850 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms