Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.5□□□□□ -0.41
H3f3cP02301 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3cP02301 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3cP02301 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3cP02301 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3cP02301 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3cP02301 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3cP02301 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3cP02301 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3cP02301 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3cP02301 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3cP02301 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3cP02301 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
H3f3cP02301 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3cP02301 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3cP02301 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3cP02301 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3cP02301 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3cP02301 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3cP02301 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3cP02301 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3cP02301 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3cP02301 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3cP02301 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3cP02301 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3cP02301 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.49□□□□□ -0.41
H3f3cP02301 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.49□□□□□ -0.41
H3f3cP02301 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3cP02301 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3cP02301 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.49□□□□□ -0.41
H3f3cP02301 Gm11594-201ENSMUST00000122313 162 ntBASIC12.49□□□□□ -0.41
H3f3cP02301 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.49□□□□□ -0.41
H3f3cP02301 Gm11025-201ENSMUST00000140773 466 ntBASIC12.49□□□□□ -0.41
H3f3cP02301 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.49□□□□□ -0.41
H3f3cP02301 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
H3f3cP02301 Gm2756-201ENSMUST00000195851 400 ntBASIC12.49□□□□□ -0.41
H3f3cP02301 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.49□□□□□ -0.41
H3f3cP02301 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
H3f3cP02301 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3cP02301 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3cP02301 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3cP02301 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3cP02301 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3cP02301 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3cP02301 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3cP02301 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.49□□□□□ -0.41
H3f3cP02301 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3cP02301 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3cP02301 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3cP02301 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3cP02301 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3cP02301 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3cP02301 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.48□□□□□ -0.41
H3f3cP02301 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3cP02301 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3cP02301 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
H3f3cP02301 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
H3f3cP02301 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3cP02301 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3cP02301 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
H3f3cP02301 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3cP02301 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
H3f3cP02301 Gm8749-201ENSMUST00000117737 331 ntBASIC12.48□□□□□ -0.41
H3f3cP02301 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.48□□□□□ -0.41
H3f3cP02301 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3cP02301 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.48□□□□□ -0.41
H3f3cP02301 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.48□□□□□ -0.41
H3f3cP02301 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.48□□□□□ -0.41
H3f3cP02301 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.48□□□□□ -0.41
H3f3cP02301 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.48□□□□□ -0.41
H3f3cP02301 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3cP02301 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.48□□□□□ -0.41
H3f3cP02301 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3cP02301 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3cP02301 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3cP02301 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3cP02301 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3cP02301 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3cP02301 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3cP02301 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
H3f3cP02301 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
H3f3cP02301 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3cP02301 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.48□□□□□ -0.41
H3f3cP02301 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
H3f3cP02301 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3cP02301 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3cP02301 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
H3f3cP02301 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3cP02301 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
H3f3cP02301 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3cP02301 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3cP02301 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.47□□□□□ -0.41
H3f3cP02301 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
H3f3cP02301 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3cP02301 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3cP02301 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3cP02301 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3cP02301 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3cP02301 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3cP02301 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms