Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
P01643 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
P01643 Gm7775-201ENSMUST00000218871 853 ntBASIC11.55□□□□□ -0.56
P01643 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
P01643 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.55□□□□□ -0.56
P01643 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P01643 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P01643 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
P01643 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
P01643 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P01643 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
P01643 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P01643 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P01643 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
P01643 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
P01643 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P01643 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
P01643 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
P01643 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
P01643 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
P01643 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P01643 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.55□□□□□ -0.56
P01643 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
P01643 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
P01643 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.54□□□□□ -0.56
P01643 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.54□□□□□ -0.56
P01643 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.54□□□□□ -0.56
P01643 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
P01643 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.54□□□□□ -0.56
P01643 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
P01643 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.54□□□□□ -0.56
P01643 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P01643 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
P01643 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
P01643 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.53□□□□□ -0.56
P01643 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.53□□□□□ -0.56
P01643 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.53□□□□□ -0.56
P01643 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Gm15487-201ENSMUST00000122373 465 ntBASIC11.53□□□□□ -0.56
P01643 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Gm46209-201ENSMUST00000217912 553 ntBASIC11.53□□□□□ -0.56
P01643 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.53□□□□□ -0.56
P01643 Gm16476-201ENSMUST00000221544 139 ntBASIC11.53□□□□□ -0.56
P01643 Dupd1-202ENSMUST00000224735 548 ntBASIC11.53□□□□□ -0.56
P01643 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
P01643 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P01643 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms