Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Gm27703-201ENSMUST00000184836 110 ntBASIC13.21□□□□□ -0.29
Abcd4O89016 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.21□□□□□ -0.29
Abcd4O89016 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.21□□□□□ -0.29
Abcd4O89016 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Abcd4O89016 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Abcd4O89016 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Abcd4O89016 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Abcd4O89016 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Abcd4O89016 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Abcd4O89016 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Abcd4O89016 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.21□□□□□ -0.3
Abcd4O89016 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Abcd4O89016 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.21□□□□□ -0.3
Abcd4O89016 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Abcd4O89016 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Abcd4O89016 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Abcd4O89016 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Abcd4O89016 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Abcd4O89016 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Abcd4O89016 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Abcd4O89016 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Abcd4O89016 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.21□□□□□ -0.3
Abcd4O89016 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Abcd4O89016 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.2□□□□□ -0.3
Abcd4O89016 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.2□□□□□ -0.3
Abcd4O89016 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd4O89016 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Abcd4O89016 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Abcd4O89016 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Abcd4O89016 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd4O89016 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd4O89016 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd4O89016 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd4O89016 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd4O89016 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd4O89016 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.2□□□□□ -0.3
Abcd4O89016 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.2□□□□□ -0.3
Abcd4O89016 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd4O89016 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.2□□□□□ -0.3
Abcd4O89016 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.2□□□□□ -0.3
Abcd4O89016 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.2□□□□□ -0.3
Abcd4O89016 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.2□□□□□ -0.3
Abcd4O89016 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.2□□□□□ -0.3
Abcd4O89016 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd4O89016 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd4O89016 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.2□□□□□ -0.3
Abcd4O89016 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd4O89016 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd4O89016 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd4O89016 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Abcd4O89016 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd4O89016 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd4O89016 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd4O89016 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd4O89016 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd4O89016 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.2□□□□□ -0.3
Abcd4O89016 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.2□□□□□ -0.3
Abcd4O89016 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd4O89016 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd4O89016 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd4O89016 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Abcd4O89016 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd4O89016 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd4O89016 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd4O89016 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd4O89016 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd4O89016 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Abcd4O89016 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd4O89016 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd4O89016 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd4O89016 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.19□□□□□ -0.3
Abcd4O89016 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Abcd4O89016 Gm16026-204ENSMUST00000162652 683 ntBASIC13.19□□□□□ -0.3
Abcd4O89016 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.19□□□□□ -0.3
Abcd4O89016 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd4O89016 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd4O89016 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd4O89016 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd4O89016 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.19□□□□□ -0.3
Abcd4O89016 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd4O89016 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd4O89016 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd4O89016 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd4O89016 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.19□□□□□ -0.3
Abcd4O89016 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd4O89016 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd4O89016 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Abcd4O89016 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Abcd4O89016 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abcd4O89016 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abcd4O89016 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abcd4O89016 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abcd4O89016 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abcd4O89016 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abcd4O89016 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Abcd4O89016 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abcd4O89016 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Abcd4O89016 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abcd4O89016 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abcd4O89016 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms