Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Hcn1O88704 Gm12008-201ENSMUST00000117791 755 ntBASIC13.95□□□□□ -0.18
Hcn1O88704 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn1O88704 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.95□□□□□ -0.18
Hcn1O88704 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn1O88704 Gm5177-201ENSMUST00000183092 997 ntBASIC13.95□□□□□ -0.18
Hcn1O88704 Gm17968-201ENSMUST00000194902 784 ntBASIC13.95□□□□□ -0.18
Hcn1O88704 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.95□□□□□ -0.18
Hcn1O88704 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.95□□□□□ -0.18
Hcn1O88704 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn1O88704 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn1O88704 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Hcn1O88704 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Hcn1O88704 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn1O88704 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Hcn1O88704 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn1O88704 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn1O88704 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn1O88704 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Hcn1O88704 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn1O88704 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn1O88704 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn1O88704 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.95□□□□□ -0.18
Hcn1O88704 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn1O88704 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn1O88704 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn1O88704 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn1O88704 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn1O88704 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn1O88704 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn1O88704 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn1O88704 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn1O88704 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Hcn1O88704 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn1O88704 Gm23547-201ENSMUST00000158210 271 ntBASIC13.94□□□□□ -0.18
Hcn1O88704 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn1O88704 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.94□□□□□ -0.18
Hcn1O88704 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Hcn1O88704 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.94□□□□□ -0.18
Hcn1O88704 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.94□□□□□ -0.18
Hcn1O88704 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn1O88704 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn1O88704 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn1O88704 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn1O88704 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn1O88704 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Hcn1O88704 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.94□□□□□ -0.18
Hcn1O88704 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn1O88704 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Hcn1O88704 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn1O88704 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.94□□□□□ -0.18
Hcn1O88704 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.94□□□□□ -0.18
Hcn1O88704 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn1O88704 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn1O88704 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn1O88704 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn1O88704 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn1O88704 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn1O88704 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn1O88704 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn1O88704 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.93□□□□□ -0.18
Hcn1O88704 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn1O88704 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn1O88704 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn1O88704 Gm25911-201ENSMUST00000157621 56 ntBASIC13.93□□□□□ -0.18
Hcn1O88704 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.93□□□□□ -0.18
Hcn1O88704 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.93□□□□□ -0.18
Hcn1O88704 Gm44492-201ENSMUST00000197012 141 ntBASIC13.93□□□□□ -0.18
Hcn1O88704 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn1O88704 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Hcn1O88704 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Hcn1O88704 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn1O88704 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn1O88704 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn1O88704 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn1O88704 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Hcn1O88704 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.93□□□□□ -0.18
Hcn1O88704 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn1O88704 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn1O88704 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn1O88704 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Hcn1O88704 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn1O88704 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.93□□□□□ -0.18
Hcn1O88704 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn1O88704 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn1O88704 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn1O88704 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Hcn1O88704 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Hcn1O88704 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn1O88704 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn1O88704 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn1O88704 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Hcn1O88704 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.92□□□□□ -0.18
Hcn1O88704 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Hcn1O88704 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn1O88704 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn1O88704 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.92□□□□□ -0.18
Hcn1O88704 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn1O88704 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.92□□□□□ -0.18
Hcn1O88704 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 139.7 ms