Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cfdp1O88271 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfdp1O88271 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfdp1O88271 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC18.13■□□□□ 0.49
Cfdp1O88271 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfdp1O88271 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfdp1O88271 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cfdp1O88271 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfdp1O88271 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfdp1O88271 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfdp1O88271 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC18.12■□□□□ 0.49
Cfdp1O88271 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cfdp1O88271 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfdp1O88271 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cfdp1O88271 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfdp1O88271 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfdp1O88271 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cfdp1O88271 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cfdp1O88271 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cfdp1O88271 Gm5566-201ENSMUST00000116118 459 ntBASIC18.12■□□□□ 0.49
Cfdp1O88271 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC18.12■□□□□ 0.49
Cfdp1O88271 Gm9719-201ENSMUST00000162765 543 ntBASIC18.12■□□□□ 0.49
Cfdp1O88271 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cfdp1O88271 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cfdp1O88271 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cfdp1O88271 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC18.12■□□□□ 0.49
Cfdp1O88271 Gm6888-201ENSMUST00000221983 706 ntBASIC18.12■□□□□ 0.49
Cfdp1O88271 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC18.12■□□□□ 0.49
Cfdp1O88271 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfdp1O88271 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfdp1O88271 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cfdp1O88271 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfdp1O88271 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cfdp1O88271 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfdp1O88271 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC18.12■□□□□ 0.49
Cfdp1O88271 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfdp1O88271 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfdp1O88271 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfdp1O88271 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cfdp1O88271 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC18.12■□□□□ 0.49
Cfdp1O88271 Gm10605-202ENSMUST00000183019 3198 ntBASIC18.12■□□□□ 0.49
Cfdp1O88271 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cfdp1O88271 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfdp1O88271 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cfdp1O88271 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfdp1O88271 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfdp1O88271 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cfdp1O88271 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfdp1O88271 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cfdp1O88271 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cfdp1O88271 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cfdp1O88271 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfdp1O88271 Mir7023-201ENSMUST00000185093 64 ntBASIC18.11■□□□□ 0.49
Cfdp1O88271 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC18.11■□□□□ 0.49
Cfdp1O88271 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.11■□□□□ 0.49
Cfdp1O88271 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Cfdp1O88271 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cfdp1O88271 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cfdp1O88271 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cfdp1O88271 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfdp1O88271 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cfdp1O88271 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cfdp1O88271 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfdp1O88271 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC18.11■□□□□ 0.49
Cfdp1O88271 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfdp1O88271 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfdp1O88271 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfdp1O88271 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfdp1O88271 Gm45605-201ENSMUST00000210265 4269 ntBASIC18.1■□□□□ 0.49
Cfdp1O88271 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfdp1O88271 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfdp1O88271 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfdp1O88271 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfdp1O88271 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfdp1O88271 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfdp1O88271 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfdp1O88271 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cfdp1O88271 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfdp1O88271 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cfdp1O88271 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfdp1O88271 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfdp1O88271 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfdp1O88271 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Cfdp1O88271 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cfdp1O88271 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfdp1O88271 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cfdp1O88271 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfdp1O88271 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Cfdp1O88271 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfdp1O88271 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfdp1O88271 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cfdp1O88271 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfdp1O88271 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cfdp1O88271 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cfdp1O88271 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfdp1O88271 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfdp1O88271 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfdp1O88271 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cfdp1O88271 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.09■□□□□ 0.49
Cfdp1O88271 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms