Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm10226O88253 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm10226O88253 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm10226O88253 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm10226O88253 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm10226O88253 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.19□□□□□ -0.62
Gm10226O88253 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.19□□□□□ -0.62
Gm10226O88253 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Gm10226O88253 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Gm10226O88253 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Gm10226O88253 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.19□□□□□ -0.62
Gm10226O88253 Gm15653-201ENSMUST00000119247 907 ntBASIC11.19□□□□□ -0.62
Gm10226O88253 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.19□□□□□ -0.62
Gm10226O88253 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Gm10226O88253 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Gm10226O88253 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Gm27306-201ENSMUST00000183970 107 ntBASIC11.19□□□□□ -0.62
Gm10226O88253 Gm44344-201ENSMUST00000200287 129 ntBASIC11.19□□□□□ -0.62
Gm10226O88253 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Gm10226O88253 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Gm10226O88253 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.19□□□□□ -0.62
Gm10226O88253 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10226O88253 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Gm10226O88253 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.19□□□□□ -0.62
Gm10226O88253 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Gm10226O88253 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Gm10226O88253 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Gm10226O88253 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Gm10226O88253 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Gm10226O88253 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Gm10226O88253 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Gm10226O88253 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.18□□□□□ -0.62
Gm10226O88253 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Gm20949-201ENSMUST00000206478 952 ntBASIC11.18□□□□□ -0.62
Gm10226O88253 Shd-206ENSMUST00000225145 998 ntBASIC11.18□□□□□ -0.62
Gm10226O88253 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Gm10226O88253 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Gm10226O88253 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.18□□□□□ -0.62
Gm10226O88253 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10226O88253 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms