Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ubr1O70481 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubr1O70481 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubr1O70481 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubr1O70481 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ubr1O70481 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ubr1O70481 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ubr1O70481 Gm8062-201ENSMUST00000139696 444 ntBASIC18.56■□□□□ 0.56
Ubr1O70481 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ubr1O70481 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC18.56■□□□□ 0.56
Ubr1O70481 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ubr1O70481 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ubr1O70481 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Ubr1O70481 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ubr1O70481 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ubr1O70481 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.56■□□□□ 0.56
Ubr1O70481 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ubr1O70481 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ubr1O70481 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ubr1O70481 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ubr1O70481 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
Ubr1O70481 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ubr1O70481 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC18.56■□□□□ 0.56
Ubr1O70481 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ubr1O70481 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ubr1O70481 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ubr1O70481 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Ubr1O70481 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ubr1O70481 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Ubr1O70481 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
Ubr1O70481 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ubr1O70481 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ubr1O70481 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ubr1O70481 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ubr1O70481 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ubr1O70481 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC18.55■□□□□ 0.56
Ubr1O70481 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ubr1O70481 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ubr1O70481 Gm23931-201ENSMUST00000103842 109 ntBASIC18.55■□□□□ 0.56
Ubr1O70481 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC18.55■□□□□ 0.56
Ubr1O70481 Gm14660-201ENSMUST00000119809 575 ntBASIC18.55■□□□□ 0.56
Ubr1O70481 Gm14730-201ENSMUST00000122378 1045 ntBASIC18.55■□□□□ 0.56
Ubr1O70481 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ubr1O70481 Gm27772-201ENSMUST00000184900 187 ntBASIC18.55■□□□□ 0.56
Ubr1O70481 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC18.55■□□□□ 0.56
Ubr1O70481 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ubr1O70481 Gm7498-201ENSMUST00000203282 1084 ntBASIC18.55■□□□□ 0.56
Ubr1O70481 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ubr1O70481 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ubr1O70481 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ubr1O70481 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC18.55■□□□□ 0.56
Ubr1O70481 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ubr1O70481 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Ubr1O70481 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ubr1O70481 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ubr1O70481 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ubr1O70481 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ubr1O70481 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ubr1O70481 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ubr1O70481 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ubr1O70481 Gm2445-201ENSMUST00000182798 989 ntBASIC18.54■□□□□ 0.56
Ubr1O70481 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC18.54■□□□□ 0.56
Ubr1O70481 AC122459.1-201ENSMUST00000228373 885 ntBASIC18.54■□□□□ 0.56
Ubr1O70481 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ubr1O70481 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ubr1O70481 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC18.54■□□□□ 0.56
Ubr1O70481 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ubr1O70481 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ubr1O70481 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ubr1O70481 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ubr1O70481 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC18.54■□□□□ 0.56
Ubr1O70481 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ubr1O70481 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ubr1O70481 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ubr1O70481 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Ubr1O70481 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ubr1O70481 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ubr1O70481 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ubr1O70481 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC18.53■□□□□ 0.56
Ubr1O70481 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ubr1O70481 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ubr1O70481 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ubr1O70481 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ubr1O70481 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ubr1O70481 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC18.53■□□□□ 0.56
Ubr1O70481 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ubr1O70481 Mup-ps23-201ENSMUST00000118063 630 ntBASIC18.53■□□□□ 0.56
Ubr1O70481 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC18.53■□□□□ 0.56
Ubr1O70481 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ubr1O70481 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ubr1O70481 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ubr1O70481 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ubr1O70481 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ubr1O70481 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Ubr1O70481 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ubr1O70481 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Ubr1O70481 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ubr1O70481 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC18.52■□□□□ 0.55
Ubr1O70481 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC18.52■□□□□ 0.55
Ubr1O70481 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms