Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim1O70400 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim1O70400 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.37□□□□□ -0.11
Pdlim1O70400 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim1O70400 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim1O70400 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.37□□□□□ -0.11
Pdlim1O70400 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.37□□□□□ -0.11
Pdlim1O70400 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.37□□□□□ -0.11
Pdlim1O70400 Gm10253-201ENSMUST00000194270 940 ntBASIC14.37□□□□□ -0.11
Pdlim1O70400 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim1O70400 Gm5867-201ENSMUST00000063197 592 ntBASIC14.37□□□□□ -0.11
Pdlim1O70400 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim1O70400 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim1O70400 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim1O70400 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim1O70400 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim1O70400 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim1O70400 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pdlim1O70400 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Pdlim1O70400 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim1O70400 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim1O70400 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim1O70400 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim1O70400 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim1O70400 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim1O70400 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Pdlim1O70400 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim1O70400 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim1O70400 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim1O70400 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim1O70400 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim1O70400 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim1O70400 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Pdlim1O70400 Gm23547-201ENSMUST00000158210 271 ntBASIC14.36□□□□□ -0.11
Pdlim1O70400 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim1O70400 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.36□□□□□ -0.11
Pdlim1O70400 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.36□□□□□ -0.11
Pdlim1O70400 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pdlim1O70400 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim1O70400 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim1O70400 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim1O70400 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim1O70400 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim1O70400 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Pdlim1O70400 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim1O70400 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim1O70400 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.36□□□□□ -0.11
Pdlim1O70400 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim1O70400 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim1O70400 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim1O70400 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim1O70400 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim1O70400 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Pdlim1O70400 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim1O70400 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim1O70400 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim1O70400 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim1O70400 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim1O70400 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pdlim1O70400 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pdlim1O70400 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim1O70400 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim1O70400 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim1O70400 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.35□□□□□ -0.11
Pdlim1O70400 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim1O70400 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.35□□□□□ -0.11
Pdlim1O70400 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim1O70400 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.35□□□□□ -0.11
Pdlim1O70400 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim1O70400 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim1O70400 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim1O70400 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.35□□□□□ -0.11
Pdlim1O70400 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pdlim1O70400 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim1O70400 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Pdlim1O70400 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.35□□□□□ -0.11
Pdlim1O70400 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim1O70400 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim1O70400 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pdlim1O70400 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim1O70400 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim1O70400 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim1O70400 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim1O70400 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.34□□□□□ -0.11
Pdlim1O70400 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim1O70400 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim1O70400 Mir449b-201ENSMUST00000104833 80 ntBASIC14.34□□□□□ -0.11
Pdlim1O70400 Gm14701-201ENSMUST00000117156 348 ntBASIC14.34□□□□□ -0.11
Pdlim1O70400 Gm13015-201ENSMUST00000118674 204 ntBASIC14.34□□□□□ -0.11
Pdlim1O70400 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim1O70400 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim1O70400 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim1O70400 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim1O70400 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim1O70400 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim1O70400 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim1O70400 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim1O70400 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim1O70400 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim1O70400 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms