Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Npc1O35604 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Npc1O35604 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Npc1O35604 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Npc1O35604 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Npc1O35604 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Npc1O35604 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Npc1O35604 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Npc1O35604 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Npc1O35604 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.22□□□□□ -0.13
Npc1O35604 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Npc1O35604 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Npc1O35604 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.22□□□□□ -0.13
Npc1O35604 Gm24158-201ENSMUST00000175263 71 ntBASIC14.22□□□□□ -0.13
Npc1O35604 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Npc1O35604 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Npc1O35604 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Npc1O35604 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Npc1O35604 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.22□□□□□ -0.13
Npc1O35604 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Npc1O35604 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Npc1O35604 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Npc1O35604 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Npc1O35604 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Npc1O35604 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Npc1O35604 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Npc1O35604 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Npc1O35604 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Npc1O35604 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Npc1O35604 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Npc1O35604 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Npc1O35604 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.21□□□□□ -0.13
Npc1O35604 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Npc1O35604 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Npc1O35604 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Npc1O35604 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Npc1O35604 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Npc1O35604 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Npc1O35604 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Npc1O35604 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.21□□□□□ -0.13
Npc1O35604 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.21□□□□□ -0.13
Npc1O35604 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.21□□□□□ -0.13
Npc1O35604 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.21□□□□□ -0.13
Npc1O35604 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.21□□□□□ -0.13
Npc1O35604 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Npc1O35604 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.21□□□□□ -0.13
Npc1O35604 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Npc1O35604 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Npc1O35604 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Npc1O35604 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Npc1O35604 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Npc1O35604 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Npc1O35604 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.21□□□□□ -0.13
Npc1O35604 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Npc1O35604 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Npc1O35604 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Npc1O35604 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Npc1O35604 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Npc1O35604 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Npc1O35604 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npc1O35604 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Npc1O35604 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Npc1O35604 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npc1O35604 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npc1O35604 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Npc1O35604 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Npc1O35604 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Npc1O35604 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npc1O35604 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.2□□□□□ -0.14
Npc1O35604 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npc1O35604 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Npc1O35604 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npc1O35604 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npc1O35604 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.2□□□□□ -0.14
Npc1O35604 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npc1O35604 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Npc1O35604 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npc1O35604 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Npc1O35604 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Npc1O35604 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Npc1O35604 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.2□□□□□ -0.14
Npc1O35604 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Npc1O35604 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.2□□□□□ -0.14
Npc1O35604 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npc1O35604 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Npc1O35604 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npc1O35604 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npc1O35604 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Npc1O35604 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npc1O35604 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npc1O35604 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npc1O35604 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npc1O35604 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms