Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Slc1a6O35544 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc1a6O35544 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.34□□□□□ -0.11
Slc1a6O35544 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Slc1a6O35544 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc1a6O35544 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc1a6O35544 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Slc1a6O35544 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc1a6O35544 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc1a6O35544 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc1a6O35544 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc1a6O35544 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc1a6O35544 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc1a6O35544 Gm7222-201ENSMUST00000117512 906 ntBASIC14.34□□□□□ -0.11
Slc1a6O35544 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Slc1a6O35544 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.34□□□□□ -0.11
Slc1a6O35544 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Slc1a6O35544 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.34□□□□□ -0.11
Slc1a6O35544 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc1a6O35544 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc1a6O35544 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc1a6O35544 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Slc1a6O35544 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Slc1a6O35544 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc1a6O35544 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc1a6O35544 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Slc1a6O35544 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc1a6O35544 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc1a6O35544 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Slc1a6O35544 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Slc1a6O35544 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Slc1a6O35544 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Slc1a6O35544 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
Slc1a6O35544 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.33□□□□□ -0.11
Slc1a6O35544 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc1a6O35544 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Slc1a6O35544 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.33□□□□□ -0.12
Slc1a6O35544 Gm25990-201ENSMUST00000102440 86 ntBASIC14.33□□□□□ -0.12
Slc1a6O35544 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Slc1a6O35544 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc1a6O35544 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc1a6O35544 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc1a6O35544 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc1a6O35544 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Slc1a6O35544 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc1a6O35544 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc1a6O35544 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc1a6O35544 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.33□□□□□ -0.12
Slc1a6O35544 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc1a6O35544 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.33□□□□□ -0.12
Slc1a6O35544 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Slc1a6O35544 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc1a6O35544 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc1a6O35544 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc1a6O35544 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc1a6O35544 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Slc1a6O35544 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc1a6O35544 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc1a6O35544 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.32□□□□□ -0.12
Slc1a6O35544 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc1a6O35544 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Slc1a6O35544 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc1a6O35544 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc1a6O35544 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Slc1a6O35544 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.32□□□□□ -0.12
Slc1a6O35544 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc1a6O35544 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc1a6O35544 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc1a6O35544 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.32□□□□□ -0.12
Slc1a6O35544 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc1a6O35544 Gm17807-201ENSMUST00000186869 298 ntBASIC14.32□□□□□ -0.12
Slc1a6O35544 Gm44357-201ENSMUST00000195897 142 ntBASIC14.32□□□□□ -0.12
Slc1a6O35544 Gm19658-201ENSMUST00000196231 138 ntBASIC14.32□□□□□ -0.12
Slc1a6O35544 Gm44367-201ENSMUST00000196836 138 ntBASIC14.32□□□□□ -0.12
Slc1a6O35544 Gm44350-201ENSMUST00000197197 138 ntBASIC14.32□□□□□ -0.12
Slc1a6O35544 Gm44390-201ENSMUST00000197533 144 ntBASIC14.32□□□□□ -0.12
Slc1a6O35544 Gm44313-201ENSMUST00000198018 138 ntBASIC14.32□□□□□ -0.12
Slc1a6O35544 Gm44486-201ENSMUST00000198508 138 ntBASIC14.32□□□□□ -0.12
Slc1a6O35544 Gm44314-201ENSMUST00000199263 138 ntBASIC14.32□□□□□ -0.12
Slc1a6O35544 Gm44394-201ENSMUST00000199558 138 ntBASIC14.32□□□□□ -0.12
Slc1a6O35544 Gm44484-201ENSMUST00000199873 138 ntBASIC14.32□□□□□ -0.12
Slc1a6O35544 Gm44466-201ENSMUST00000200264 138 ntBASIC14.32□□□□□ -0.12
Slc1a6O35544 Gm44359-201ENSMUST00000200671 138 ntBASIC14.32□□□□□ -0.12
Slc1a6O35544 Olfr286-202ENSMUST00000205305 969 ntBASIC14.32□□□□□ -0.12
Slc1a6O35544 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc1a6O35544 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc1a6O35544 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Slc1a6O35544 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Slc1a6O35544 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc1a6O35544 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.32□□□□□ -0.12
Slc1a6O35544 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc1a6O35544 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc1a6O35544 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.32□□□□□ -0.12
Slc1a6O35544 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc1a6O35544 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc1a6O35544 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc1a6O35544 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Slc1a6O35544 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc1a6O35544 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc1a6O35544 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms