Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Stx1aO35526 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Stx1aO35526 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Stx1aO35526 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Stx1aO35526 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Stx1aO35526 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Stx1aO35526 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Stx1aO35526 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Stx1aO35526 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.36■□□□□ 0.21
Stx1aO35526 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Stx1aO35526 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.36■□□□□ 0.21
Stx1aO35526 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Stx1aO35526 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Stx1aO35526 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.36■□□□□ 0.21
Stx1aO35526 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Stx1aO35526 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Stx1aO35526 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Stx1aO35526 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Stx1aO35526 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Stx1aO35526 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
Stx1aO35526 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Stx1aO35526 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Stx1aO35526 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Stx1aO35526 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Stx1aO35526 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Stx1aO35526 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Stx1aO35526 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Stx1aO35526 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Stx1aO35526 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Stx1aO35526 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Stx1aO35526 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.35■□□□□ 0.21
Stx1aO35526 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Stx1aO35526 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.35■□□□□ 0.21
Stx1aO35526 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Stx1aO35526 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Stx1aO35526 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Stx1aO35526 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Stx1aO35526 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Stx1aO35526 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Stx1aO35526 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Stx1aO35526 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Stx1aO35526 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Stx1aO35526 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Stx1aO35526 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Stx1aO35526 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Stx1aO35526 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Stx1aO35526 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Stx1aO35526 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Stx1aO35526 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.35■□□□□ 0.21
Stx1aO35526 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.35■□□□□ 0.21
Stx1aO35526 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Stx1aO35526 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Stx1aO35526 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Stx1aO35526 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Stx1aO35526 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Stx1aO35526 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.35■□□□□ 0.21
Stx1aO35526 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Stx1aO35526 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Stx1aO35526 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Stx1aO35526 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Stx1aO35526 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Stx1aO35526 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Stx1aO35526 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Stx1aO35526 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.35■□□□□ 0.21
Stx1aO35526 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Stx1aO35526 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Stx1aO35526 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.34■□□□□ 0.21
Stx1aO35526 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.34■□□□□ 0.21
Stx1aO35526 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.34■□□□□ 0.21
Stx1aO35526 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.34■□□□□ 0.21
Stx1aO35526 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.34■□□□□ 0.21
Stx1aO35526 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.34■□□□□ 0.21
Stx1aO35526 Gm14042-201ENSMUST00000120139 833 ntBASIC16.34■□□□□ 0.21
Stx1aO35526 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.34■□□□□ 0.21
Stx1aO35526 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.34■□□□□ 0.21
Stx1aO35526 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Gm45167-201ENSMUST00000208007 322 ntBASIC16.34■□□□□ 0.21
Stx1aO35526 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Stx1aO35526 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms