Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf3O08791 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf3O08791 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ebf3O08791 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf3O08791 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf3O08791 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf3O08791 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf3O08791 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.12■□□□□ 0.01
Ebf3O08791 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf3O08791 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf3O08791 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ebf3O08791 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ebf3O08791 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.11■□□□□ 0.01
Ebf3O08791 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.11■□□□□ 0.01
Ebf3O08791 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf3O08791 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf3O08791 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf3O08791 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf3O08791 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf3O08791 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.11■□□□□ 0.01
Ebf3O08791 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.11■□□□□ 0.01
Ebf3O08791 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.11■□□□□ 0.01
Ebf3O08791 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf3O08791 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf3O08791 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf3O08791 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf3O08791 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf3O08791 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ebf3O08791 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf3O08791 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf3O08791 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf3O08791 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ebf3O08791 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf3O08791 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ebf3O08791 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf3O08791 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf3O08791 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf3O08791 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf3O08791 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf3O08791 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf3O08791 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf3O08791 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Ebf3O08791 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ebf3O08791 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.1■□□□□ 0.01
Ebf3O08791 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf3O08791 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ebf3O08791 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf3O08791 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf3O08791 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.1■□□□□ 0.01
Ebf3O08791 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf3O08791 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf3O08791 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf3O08791 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf3O08791 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf3O08791 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ebf3O08791 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.1■□□□□ 0.01
Ebf3O08791 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf3O08791 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf3O08791 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf3O08791 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf3O08791 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf3O08791 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf3O08791 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf3O08791 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf3O08791 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf3O08791 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
Ebf3O08791 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf3O08791 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf3O08791 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf3O08791 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.09■□□□□ 0.01
Ebf3O08791 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf3O08791 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf3O08791 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.09■□□□□ 0.01
Ebf3O08791 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf3O08791 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.09■□□□□ 0.01
Ebf3O08791 Gm14767-201ENSMUST00000121559 586 ntBASIC15.09■□□□□ 0.01
Ebf3O08791 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf3O08791 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf3O08791 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.09■□□□□ 0.01
Ebf3O08791 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf3O08791 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf3O08791 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf3O08791 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf3O08791 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf3O08791 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf3O08791 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf3O08791 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.09■□□□□ 0.01
Ebf3O08791 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf3O08791 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf3O08791 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf3O08791 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.09■□□□□ 0.01
Ebf3O08791 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf3O08791 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ebf3O08791 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ebf3O08791 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ebf3O08791 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ebf3O08791 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
Ebf3O08791 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ebf3O08791 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ebf3O08791 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms