Protein–RNA interactions for Protein: J3QPR6

Rfpl4b, MCG1377, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfpl4bJ3QPR6 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfpl4bJ3QPR6 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.66■□□□□ 0.26
Rfpl4bJ3QPR6 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rfpl4bJ3QPR6 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfpl4bJ3QPR6 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfpl4bJ3QPR6 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.66■□□□□ 0.26
Rfpl4bJ3QPR6 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfpl4bJ3QPR6 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfpl4bJ3QPR6 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfpl4bJ3QPR6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rfpl4bJ3QPR6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfpl4bJ3QPR6 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfpl4bJ3QPR6 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Rfpl4bJ3QPR6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rfpl4bJ3QPR6 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rfpl4bJ3QPR6 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfpl4bJ3QPR6 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rfpl4bJ3QPR6 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfpl4bJ3QPR6 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfpl4bJ3QPR6 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfpl4bJ3QPR6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfpl4bJ3QPR6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfpl4bJ3QPR6 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfpl4bJ3QPR6 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfpl4bJ3QPR6 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfpl4bJ3QPR6 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfpl4bJ3QPR6 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.64■□□□□ 0.25
Rfpl4bJ3QPR6 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfpl4bJ3QPR6 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.64■□□□□ 0.25
Rfpl4bJ3QPR6 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfpl4bJ3QPR6 Mir125a-201ENSMUST00000083545 68 ntBASIC16.64■□□□□ 0.25
Rfpl4bJ3QPR6 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfpl4bJ3QPR6 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
Rfpl4bJ3QPR6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfpl4bJ3QPR6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfpl4bJ3QPR6 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfpl4bJ3QPR6 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfpl4bJ3QPR6 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfpl4bJ3QPR6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 Mir6392-201ENSMUST00000184924 108 ntBASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 Gm6266-201ENSMUST00000203844 806 ntBASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfpl4bJ3QPR6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms