Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Gm10154-201ENSMUST00000084445 354 ntBASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh9F8VPK8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Gm16198-201ENSMUST00000118766 670 ntBASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh9F8VPK8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms