Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb9E9Q5G2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb9E9Q5G2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb9E9Q5G2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.08■□□□□ 0.33
Pcdhb9E9Q5G2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb9E9Q5G2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb9E9Q5G2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb9E9Q5G2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.08■□□□□ 0.33
Pcdhb9E9Q5G2 BC001981-202ENSMUST00000191393 1545 ntBASIC17.08■□□□□ 0.32
Pcdhb9E9Q5G2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb9E9Q5G2 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb9E9Q5G2 Gm13453-201ENSMUST00000118708 357 ntBASIC17.08■□□□□ 0.32
Pcdhb9E9Q5G2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb9E9Q5G2 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb9E9Q5G2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb9E9Q5G2 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.08■□□□□ 0.32
Pcdhb9E9Q5G2 Dupd1-202ENSMUST00000224735 548 ntBASIC17.08■□□□□ 0.32
Pcdhb9E9Q5G2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb9E9Q5G2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb9E9Q5G2 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb9E9Q5G2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb9E9Q5G2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb9E9Q5G2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb9E9Q5G2 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.08■□□□□ 0.32
Pcdhb9E9Q5G2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb9E9Q5G2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb9E9Q5G2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Pcdhb9E9Q5G2 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Pcdhb9E9Q5G2 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.08■□□□□ 0.32
Pcdhb9E9Q5G2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb9E9Q5G2 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb9E9Q5G2 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb9E9Q5G2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb9E9Q5G2 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb9E9Q5G2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb9E9Q5G2 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb9E9Q5G2 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb9E9Q5G2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb9E9Q5G2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb9E9Q5G2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb9E9Q5G2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.07■□□□□ 0.32
Pcdhb9E9Q5G2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhb9E9Q5G2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.07■□□□□ 0.32
Pcdhb9E9Q5G2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.07■□□□□ 0.32
Pcdhb9E9Q5G2 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.07■□□□□ 0.32
Pcdhb9E9Q5G2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb9E9Q5G2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb9E9Q5G2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb9E9Q5G2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.07■□□□□ 0.32
Pcdhb9E9Q5G2 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb9E9Q5G2 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhb9E9Q5G2 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb9E9Q5G2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Mir1897-201ENSMUST00000122581 272 ntBASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Mir7023-201ENSMUST00000185093 64 ntBASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Gm10576-201ENSMUST00000191927 825 ntBASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Gm20949-201ENSMUST00000206478 952 ntBASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb9E9Q5G2 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms