Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh17E9PXF0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh17E9PXF0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh17E9PXF0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh17E9PXF0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh17E9PXF0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh17E9PXF0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh17E9PXF0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh17E9PXF0 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Pcdh17E9PXF0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.56□□□□□ -0.24
Pcdh17E9PXF0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh17E9PXF0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh17E9PXF0 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh17E9PXF0 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh17E9PXF0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Gm12151-201ENSMUST00000121374 290 ntBASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Gm28630-201ENSMUST00000187806 498 ntBASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Gm18766-201ENSMUST00000189811 808 ntBASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh17E9PXF0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Gm13453-201ENSMUST00000118708 357 ntBASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Gm25144-201ENSMUST00000179561 110 ntBASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Gm25352-201ENSMUST00000179815 110 ntBASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Gm6888-201ENSMUST00000221983 706 ntBASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh17E9PXF0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms