Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chd3B1AR17 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Chd3B1AR17 Gm9063-201ENSMUST00000223299 582 ntBASIC14.24□□□□□ -0.13
Chd3B1AR17 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd3B1AR17 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Chd3B1AR17 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd3B1AR17 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd3B1AR17 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd3B1AR17 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd3B1AR17 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.24□□□□□ -0.13
Chd3B1AR17 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd3B1AR17 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd3B1AR17 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Chd3B1AR17 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd3B1AR17 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chd3B1AR17 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd3B1AR17 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd3B1AR17 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chd3B1AR17 Gm27989-201ENSMUST00000184721 107 ntBASIC14.23□□□□□ -0.13
Chd3B1AR17 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.23□□□□□ -0.13
Chd3B1AR17 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd3B1AR17 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd3B1AR17 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd3B1AR17 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd3B1AR17 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.23□□□□□ -0.13
Chd3B1AR17 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chd3B1AR17 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd3B1AR17 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chd3B1AR17 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd3B1AR17 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd3B1AR17 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Chd3B1AR17 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd3B1AR17 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Chd3B1AR17 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd3B1AR17 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd3B1AR17 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.23□□□□□ -0.13
Chd3B1AR17 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd3B1AR17 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.23□□□□□ -0.13
Chd3B1AR17 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Chd3B1AR17 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Chd3B1AR17 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.22□□□□□ -0.13
Chd3B1AR17 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chd3B1AR17 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd3B1AR17 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd3B1AR17 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.22□□□□□ -0.13
Chd3B1AR17 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd3B1AR17 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd3B1AR17 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd3B1AR17 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chd3B1AR17 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chd3B1AR17 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd3B1AR17 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chd3B1AR17 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd3B1AR17 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd3B1AR17 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd3B1AR17 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd3B1AR17 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Chd3B1AR17 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd3B1AR17 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.22□□□□□ -0.13
Chd3B1AR17 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd3B1AR17 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd3B1AR17 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Chd3B1AR17 Gm11424-201ENSMUST00000121929 829 ntBASIC14.22□□□□□ -0.13
Chd3B1AR17 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.22□□□□□ -0.13
Chd3B1AR17 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.22□□□□□ -0.13
Chd3B1AR17 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Chd3B1AR17 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd3B1AR17 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.22□□□□□ -0.13
Chd3B1AR17 Gm9182-201ENSMUST00000217829 639 ntBASIC14.22□□□□□ -0.13
Chd3B1AR17 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd3B1AR17 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd3B1AR17 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Chd3B1AR17 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
Chd3B1AR17 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd3B1AR17 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Chd3B1AR17 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd3B1AR17 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Chd3B1AR17 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd3B1AR17 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd3B1AR17 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chd3B1AR17 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chd3B1AR17 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Chd3B1AR17 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chd3B1AR17 Gm6222-201ENSMUST00000120787 396 ntBASIC14.21□□□□□ -0.13
Chd3B1AR17 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chd3B1AR17 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.21□□□□□ -0.13
Chd3B1AR17 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chd3B1AR17 Gm3436-201ENSMUST00000179930 840 ntBASIC14.21□□□□□ -0.13
Chd3B1AR17 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chd3B1AR17 Mir8102-201ENSMUST00000184148 139 ntBASIC14.21□□□□□ -0.13
Chd3B1AR17 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.21□□□□□ -0.13
Chd3B1AR17 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.21□□□□□ -0.13
Chd3B1AR17 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chd3B1AR17 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.21□□□□□ -0.13
Chd3B1AR17 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
Chd3B1AR17 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.21□□□□□ -0.13
Chd3B1AR17 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chd3B1AR17 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Chd3B1AR17 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chd3B1AR17 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms