Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Gm15823-201ENSMUST00000064305 670 ntBASIC12.25□□□□□ -0.45
Col6a4A2AX52 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a4A2AX52 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.24□□□□□ -0.45
Col6a4A2AX52 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Dancr-204ENSMUST00000132389 2347 ntBASIC12.24□□□□□ -0.45
Col6a4A2AX52 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a4A2AX52 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Gm5354-201ENSMUST00000182417 973 ntBASIC12.23□□□□□ -0.45
Col6a4A2AX52 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.23□□□□□ -0.45
Col6a4A2AX52 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a4A2AX52 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.23□□□□□ -0.45
Col6a4A2AX52 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a4A2AX52 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.23□□□□□ -0.45
Col6a4A2AX52 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.23□□□□□ -0.45
Col6a4A2AX52 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a4A2AX52 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms