Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.15□□□□□ -0.46
Trav12-1A0N8R1 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav12-1A0N8R1 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav12-1A0N8R1 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav12-1A0N8R1 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav12-1A0N8R1 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav12-1A0N8R1 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Gm7153-201ENSMUST00000117092 455 ntBASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-1A0N8R1 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav12-1A0N8R1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-1A0N8R1 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-1A0N8R1 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-1A0N8R1 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-1A0N8R1 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-1A0N8R1 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-1A0N8R1 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-1A0N8R1 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-1A0N8R1 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-1A0N8R1 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav12-1A0N8R1 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-1A0N8R1 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.13□□□□□ -0.47
Trav12-1A0N8R1 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav12-1A0N8R1 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav12-1A0N8R1 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-1A0N8R1 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-1A0N8R1 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.13□□□□□ -0.47
Trav12-1A0N8R1 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-1A0N8R1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-1A0N8R1 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav12-1A0N8R1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms