Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Gm15483-201ENSMUST00000120338 456 ntBASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Gm12134-201ENSMUST00000122109 520 ntBASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Gm9726-201ENSMUST00000180321 678 ntBASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Mir8117-201ENSMUST00000184773 107 ntBASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Gm2451-201ENSMUST00000199447 999 ntBASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Gm10290-201ENSMUST00000200451 999 ntBASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lnp1A0A1B0GSK3 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Gm15427-201ENSMUST00000117288 531 ntBASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Gm8749-201ENSMUST00000117737 331 ntBASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Rpph1-201ENSMUST00000175096 319 ntBASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Gm5264-201ENSMUST00000190584 848 ntBASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Gm10175-201ENSMUST00000086013 645 ntBASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lnp1A0A1B0GSK3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lnp1A0A1B0GSK3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lnp1A0A1B0GSK3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lnp1A0A1B0GSK3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lnp1A0A1B0GSK3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.09□□□□□ -0.47
Lnp1A0A1B0GSK3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.09□□□□□ -0.47
Lnp1A0A1B0GSK3 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lnp1A0A1B0GSK3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lnp1A0A1B0GSK3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lnp1A0A1B0GSK3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lnp1A0A1B0GSK3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lnp1A0A1B0GSK3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lnp1A0A1B0GSK3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lnp1A0A1B0GSK3 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.09□□□□□ -0.47
Lnp1A0A1B0GSK3 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms