Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Gm13365-201ENSMUST00000121188 973 ntBASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Rpph1-201ENSMUST00000175096 319 ntBASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Gm44335-201ENSMUST00000196879 141 ntBASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Gm44297-201ENSMUST00000198304 141 ntBASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Gm44346-201ENSMUST00000198851 141 ntBASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Gm11839-201ENSMUST00000120647 1953 ntBASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Gm12017-201ENSMUST00000122453 1003 ntBASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Gm8396-201ENSMUST00000057361 823 ntBASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13n-1A0A0G2JEU8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav13n-1A0A0G2JEU8 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms