Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5-4A0A075B652 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Mir5131-201ENSMUST00000175426 93 ntBASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5-4A0A075B652 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5-4A0A075B652 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms