Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Smarcb1Q9Z0H3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smarcb1Q9Z0H3 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.16■■□□□ 1.3
Smarcb1Q9Z0H3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Smarcb1Q9Z0H3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Smarcb1Q9Z0H3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Smarcb1Q9Z0H3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Smarcb1Q9Z0H3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.14■■□□□ 1.3
Smarcb1Q9Z0H3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.14■■□□□ 1.29
Smarcb1Q9Z0H3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC23.14■■□□□ 1.29
Smarcb1Q9Z0H3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Smarcb1Q9Z0H3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Smarcb1Q9Z0H3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Smarcb1Q9Z0H3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Smarcb1Q9Z0H3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
Smarcb1Q9Z0H3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Smarcb1Q9Z0H3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC23.12■■□□□ 1.29
Smarcb1Q9Z0H3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smarcb1Q9Z0H3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smarcb1Q9Z0H3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Smarcb1Q9Z0H3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Smarcb1Q9Z0H3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Smarcb1Q9Z0H3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smarcb1Q9Z0H3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smarcb1Q9Z0H3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smarcb1Q9Z0H3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Smarcb1Q9Z0H3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
Smarcb1Q9Z0H3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Smarcb1Q9Z0H3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.1■■□□□ 1.29
Smarcb1Q9Z0H3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Smarcb1Q9Z0H3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Smarcb1Q9Z0H3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Smarcb1Q9Z0H3 Gm15546-201ENSMUST00000122095 826 ntBASIC23.09■■□□□ 1.29
Smarcb1Q9Z0H3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.09■■□□□ 1.29
Smarcb1Q9Z0H3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Smarcb1Q9Z0H3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Smarcb1Q9Z0H3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Smarcb1Q9Z0H3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Smarcb1Q9Z0H3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Smarcb1Q9Z0H3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Smarcb1Q9Z0H3 Gm13238-201ENSMUST00000117655 780 ntBASIC23.07■■□□□ 1.28
Smarcb1Q9Z0H3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Smarcb1Q9Z0H3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Smarcb1Q9Z0H3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.07■■□□□ 1.28
Smarcb1Q9Z0H3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Smarcb1Q9Z0H3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Smarcb1Q9Z0H3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Smarcb1Q9Z0H3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Smarcb1Q9Z0H3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Smarcb1Q9Z0H3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Smarcb1Q9Z0H3 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.04■■□□□ 1.28
Smarcb1Q9Z0H3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Smarcb1Q9Z0H3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Smarcb1Q9Z0H3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.04■■□□□ 1.28
Smarcb1Q9Z0H3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Smarcb1Q9Z0H3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Smarcb1Q9Z0H3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Smarcb1Q9Z0H3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Smarcb1Q9Z0H3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Smarcb1Q9Z0H3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC23.02■■□□□ 1.28
Smarcb1Q9Z0H3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23.02■■□□□ 1.28
Smarcb1Q9Z0H3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Smarcb1Q9Z0H3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Smarcb1Q9Z0H3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Smarcb1Q9Z0H3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Smarcb1Q9Z0H3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Smarcb1Q9Z0H3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23■■□□□ 1.27
Smarcb1Q9Z0H3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Smarcb1Q9Z0H3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23■■□□□ 1.27
Smarcb1Q9Z0H3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Smarcb1Q9Z0H3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23■■□□□ 1.27
Smarcb1Q9Z0H3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23■■□□□ 1.27
Smarcb1Q9Z0H3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Smarcb1Q9Z0H3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23■■□□□ 1.27
Smarcb1Q9Z0H3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.99■■□□□ 1.27
Smarcb1Q9Z0H3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.99■■□□□ 1.27
Smarcb1Q9Z0H3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.99■■□□□ 1.27
Smarcb1Q9Z0H3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Smarcb1Q9Z0H3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Smarcb1Q9Z0H3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Smarcb1Q9Z0H3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Smarcb1Q9Z0H3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Smarcb1Q9Z0H3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Smarcb1Q9Z0H3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Smarcb1Q9Z0H3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Smarcb1Q9Z0H3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Smarcb1Q9Z0H3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.96■■□□□ 1.27
Smarcb1Q9Z0H3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Smarcb1Q9Z0H3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Smarcb1Q9Z0H3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Smarcb1Q9Z0H3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.27
Smarcb1Q9Z0H3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Smarcb1Q9Z0H3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Smarcb1Q9Z0H3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Smarcb1Q9Z0H3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.95■■□□□ 1.26
Smarcb1Q9Z0H3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Smarcb1Q9Z0H3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Smarcb1Q9Z0H3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.95■■□□□ 1.26
Smarcb1Q9Z0H3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Smarcb1Q9Z0H3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms