Protein–RNA interactions for Protein: Q9WTN3

Srebf1, Sterol regulatory element-binding protein 1, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srebf1Q9WTN3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.35■■□□□ 1.01
Srebf1Q9WTN3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.35■■□□□ 1.01
Srebf1Q9WTN3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.35■■□□□ 1.01
Srebf1Q9WTN3 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.35■■□□□ 1.01
Srebf1Q9WTN3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Srebf1Q9WTN3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Srebf1Q9WTN3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Srebf1Q9WTN3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Srebf1Q9WTN3 Gm15039-201ENSMUST00000118914 875 ntBASIC21.34■■□□□ 1.01
Srebf1Q9WTN3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.34■■□□□ 1.01
Srebf1Q9WTN3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Srebf1Q9WTN3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Srebf1Q9WTN3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Srebf1Q9WTN3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.34■■□□□ 1.01
Srebf1Q9WTN3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Srebf1Q9WTN3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Srebf1Q9WTN3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Srebf1Q9WTN3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.33■■□□□ 1.01
Srebf1Q9WTN3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.32■■□□□ 1
Srebf1Q9WTN3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.32■■□□□ 1
Srebf1Q9WTN3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Srebf1Q9WTN3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Srebf1Q9WTN3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Srebf1Q9WTN3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Srebf1Q9WTN3 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.31■■□□□ 1
Srebf1Q9WTN3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Srebf1Q9WTN3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Srebf1Q9WTN3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.31■■□□□ 1
Srebf1Q9WTN3 Gm45444-201ENSMUST00000211394 898 ntBASIC21.31■■□□□ 1
Srebf1Q9WTN3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
Srebf1Q9WTN3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Srebf1Q9WTN3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.3■■□□□ 1
Srebf1Q9WTN3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.3■■□□□ 1
Srebf1Q9WTN3 Gm13238-201ENSMUST00000117655 780 ntBASIC21.3■■□□□ 1
Srebf1Q9WTN3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.3■■□□□ 1
Srebf1Q9WTN3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Srebf1Q9WTN3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Srebf1Q9WTN3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Srebf1Q9WTN3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Srebf1Q9WTN3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.29■■□□□ 1
Srebf1Q9WTN3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Srebf1Q9WTN3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Srebf1Q9WTN3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.29■■□□□ 1
Srebf1Q9WTN3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Srebf1Q9WTN3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.28■■□□□ 1
Srebf1Q9WTN3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Srebf1Q9WTN3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Srebf1Q9WTN3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Srebf1Q9WTN3 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.27■■□□□ 1
Srebf1Q9WTN3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Srebf1Q9WTN3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Srebf1Q9WTN3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Srebf1Q9WTN3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Srebf1Q9WTN3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Srebf1Q9WTN3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Srebf1Q9WTN3 Gm15820-201ENSMUST00000201566 728 ntBASIC21.26■□□□□ 0.99
Srebf1Q9WTN3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Srebf1Q9WTN3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Srebf1Q9WTN3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Srebf1Q9WTN3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Srebf1Q9WTN3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Srebf1Q9WTN3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Srebf1Q9WTN3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Srebf1Q9WTN3 Rps24-207ENSMUST00000224568 714 ntBASIC21.25■□□□□ 0.99
Srebf1Q9WTN3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Srebf1Q9WTN3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.24■□□□□ 0.99
Srebf1Q9WTN3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.24■□□□□ 0.99
Srebf1Q9WTN3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Srebf1Q9WTN3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Srebf1Q9WTN3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Srebf1Q9WTN3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Srebf1Q9WTN3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.22■□□□□ 0.99
Srebf1Q9WTN3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Srebf1Q9WTN3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Srebf1Q9WTN3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Srebf1Q9WTN3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Srebf1Q9WTN3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Srebf1Q9WTN3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Srebf1Q9WTN3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.21■□□□□ 0.99
Srebf1Q9WTN3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.21■□□□□ 0.99
Srebf1Q9WTN3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Srebf1Q9WTN3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.21■□□□□ 0.99
Srebf1Q9WTN3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Srebf1Q9WTN3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Srebf1Q9WTN3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Srebf1Q9WTN3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Srebf1Q9WTN3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Srebf1Q9WTN3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.2■□□□□ 0.98
Srebf1Q9WTN3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Srebf1Q9WTN3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Srebf1Q9WTN3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Srebf1Q9WTN3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Srebf1Q9WTN3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Srebf1Q9WTN3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.19■□□□□ 0.98
Srebf1Q9WTN3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Srebf1Q9WTN3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Srebf1Q9WTN3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Srebf1Q9WTN3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Srebf1Q9WTN3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Srebf1Q9WTN3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms